FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808405

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808405
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115295
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1824915.828093152348325No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT42953.7252265926536277No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG34512.9931913786374085No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA31822.7598768376772624No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA31482.7303872674443816No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG25852.2420746779999132No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT22191.9246281278459603No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG19081.654885294245197No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG14491.2567760961013053No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA12741.1049915434320656No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA12001.0408083611605012No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA11671.0121861312285876No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA11150.9670844355782992No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT11040.9575436922676612No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG8870.769330846957804No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC8060.69907628257947No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT7600.6591786287349841No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT7430.6444338436185437No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA7400.6418318227156425No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA7250.6288217182011362No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7220.6262196972982349No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA6660.5776486404440782No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT6510.5646385359295719No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA6180.5360163059976583No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT6170.535148965696691No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT6040.523873541784119No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT6040.523873541784119No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT6020.5221388611821848No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC6010.5212715208812178No Hit
CATAGAGTCCTTCCCTCTCACACATGTCACTGAGCTGAGGGTCACTTCTA5820.5047920551628431No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC5630.48831258944446854No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAACAATGCCTCACACACAGGTCTA5590.4848432282406002No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT5420.4700984431241598No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT5270.45708833860965353No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGGGAAAGGTATGTGGCA5050.4380068519883777No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4890.42412940717290426No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT4890.42412940717290426No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC4510.39117047573615504No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA4420.38336441302745133No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA4340.37642569061971465No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG4260.36948696821197796No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG4240.3677522876100438No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATTGGGTAGAGAGTTCTGTAG4240.3677522876100438No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAACCATGTCGTCAG4240.3677522876100438No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT4200.36428292640617543No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCATGTCGTCA4020.34867080098876796No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT3930.3408647382800642No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGATAGCGAGAAGAGTGGAGGCT3880.33652803677522874No Hit
CATAGAGGCACGATCTTGTTTCACTGTACACATAGGAGGAGCTGACTTAC3790.32872197406652504No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT3680.31918123075588706No Hit
CATAGAGTGCTCTCTTTCCCCACCCTATGGTTCTACACATAGAGAACAGC3530.3061711262413808No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTAGGAATCTTTGGGAGGCT3410.2957630426297758No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAAGAAGTGTATT3400.2948957023288087No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG3330.2888243202220391No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATTCTCTCAGGGCTGTTCTCTAT3220.2792835769114012No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGGAATCTTTGGGAGG3200.277548896309467No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA3130.27147751420269745No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA3010.2610694305910924No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG2970.2576000693872241No Hit
CATAGATCCCATACTCCTCCATTACCCTGTTCTACACATAGGAGGAGCTG2830.24545730517368491No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTAGAAGTGTATTAATTAT2800.24285528427078362No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCATAGACTCTGTTTACTCGGAGAT2770.2402532633678824No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCCTCTGTTTACTCGGAGATTTGA2770.2402532633678824No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGAAGTGTATTA2760.2393859230669153No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT2650.22984517975627736No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC2640.2289778394553103No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT2620.22724315885337612No Hit
CATAGATCACCAGATGCCAGTTGTGCCATGCTGAAGTCCCATGATCTATG2620.22724315885337612No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2590.22464113795047486No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC2580.2237737976495078No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA2530.21943709614467236No Hit
CATAGATCACCAGATGCCAGTTGTGCCCCAGGTAGCAAAACAGAGTCTAT2460.21336571403790275No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGAGACTTGGTCTCATAGAGGAGA2450.2124983737369357No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGACGGCAACATATCAGAAG2440.2116310334359686No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC2400.20816167223210025No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCATGTCGTCAGTGTCAGG2400.20816167223210025No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGAGACTTGGTCTCATAGAGGAGAA2370.20555965132919904No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA2300.19948826922242943No Hit
CATAGAGGCACGATCTTGTTTCACTGTTACGATAGCGAGAAGAGTGGAGG2260.1960189080185611No Hit
CATAGAGTCCTTCCCTCTCACACATGTGATGTGCTATGAAGCAGAGGTAG2260.1960189080185611No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2220.19254954681469275No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG2200.1908148662127586No Hit
CATAGACCACACACACAACTGAGAGTGTAGATACGGAAGACACAGCACAC2150.18647816470792317No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2150.18647816470792317No Hit
CATAGACGAATTGCCCATGTCAGTAAATCATAGACCTTTTTCTGTAGTCA2040.17693742139728522No Hit
CATAGACCATCCCTTCTACAAGAGGCAGAGGACAGGTAGAAGTGTATTAA2030.17607008109631814No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT2020.17520274079535106No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGCATGATGTGCTATGAAGCAG1990.1726007198924498No Hit
CATAGACCATCCCTTCTACAAGAGGCATCTATGTGTAGAACCATGTCGTC1970.17086603929051564No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGCCCCAGGTAGCAAAACAGA1950.16913135868858148No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA1930.1673966780866473No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1910.1656619974847131No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGGCAGAGAGTGTGTTGTATTCTA1880.16305997658181187No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCCCCAGGTAGCAAAAC1870.1621926362808448No Hit
CATAGAGGCACAGGGATAATGAGGGAGTATGAGGAGAATGATATTGTTGC1850.16045795567891064No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1840.15959061537794353No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGACTACACGGCAACATATCAGAAG1840.15959061537794353No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1820.15785593477600937No Hit
CATAGAGCCCCCAGAGAAGAATGACCTGGTCTCATAGAGCCCCCAGAGGA1780.15438657357214103No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGATAGCGAGAAGAGTGG1780.15438657357214103No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1710.14831519146537145No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGGAATCTTTGGGAGGCTATTA1690.14658051086343726No Hit
CATAGAGGCACAGGGATAATGAGGGAGACTTGGTCTCATAGAGGAGAATG1680.14571317056247018No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACACTGTCTTCAGCTCTTTGAGGC1650.14311114965956895No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC1570.13617242725183226No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATTGTCTTCAGCTCTTTGAGGC1550.13443774664989808No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCAGTGTCCCCAGGTAGCAAAACAG1550.13443774664989808No Hit
CATAGAAACAGCAAAGCCCTCCACCACAGGTCTATGAGGAAACATTGGAA1500.13010104514506265No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA1480.1283663645431285No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT1440.12489700333926017No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1440.12489700333926017No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA1410.1222949824363589No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA1410.1222949824363589No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGTGCCCGGCTTCCTTGGGACA1330.11535626002862223No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGGTAGCAAAGACTTGGTCTCAT1320.11448891972765515No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCGAGTATCTGGGACTACAGGT1280.11101955852378681No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAAGTGATCTACAGTTTCAATAC1280.11101955852378681No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTAGATGGATCATCTATGTGT1280.11101955852378681No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGAGAAGTGTATTAATTATC1270.11015221822281973No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTACAGGGCAGAGAGTGTGTT1270.11015221822281973No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1250.10841753762088555No Hit
CATAGAGCCCCCAGAGAAGAATGACCTAGAGCCCCCAGAGGAGAATGATA1220.1058155167179843No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1210.10494817641701722No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT1200.10408083611605012No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCTGTTTACTCGGAGATTTG1190.10321349581508305No Hit
CATAGAGGCACAGGGATAATGAGGGAGAGGAATCTTTGGGAGGCTATTAG1190.10321349581508305No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1180.10234615551411597No Hit
CATAGAAACAGCAAAGCCCTCCACCACAACAATGCCTCACACACAGGTCT1160.1006114749121818No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)