FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808406

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808406
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences551175
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA6070811.014287658184788No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC422947.673424955776296No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC331866.020955232004354No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC307655.5817117975234725No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT180863.2813534721277273No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG146632.6603165963623168No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA137482.4943076155486006No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA134482.4398784415113166No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA117292.1279992742776797No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG107491.9501973057558852No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA95991.741552138612963No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC81731.48283213135574No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG80801.465959087404182No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT74881.3585521839706083No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA73381.3313375969519663No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC68781.2478795300947974No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC66951.2146777339320542No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG59741.0838662856624484No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT53590.9722864788860163No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC52730.9566834489953281No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC51730.9385403909829001No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGAGACAGCCGCTCACCTCTA51070.9265659726946978No Hit
CATAGAGCTATCAGTATACTCCCACCATGATCTGAGCAAGGATAGCCCTC50310.9127772486052523No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT41510.753118338095886No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG41290.7491268653331519No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACACTTCAGTTGACTATA40230.7298952238399783No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACATAGAGGCCTGAGATTGCTGC34660.6288383907107542No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA30500.5533632693790538No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT30270.5491903660361954No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC29960.5435660180523427No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC28020.5083684855082324No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG27800.5043770127454983No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG27240.49421690025853854No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTATGGGCAACAGAACAAC26930.4885925522746859No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT26330.4777067174672291No Hit
CATAGATTCTCCCTTGTGCTTTTGGTTACACATAGACTCTTCACTATGTC25920.4702680636821336No Hit
CATAGACTTGATGCCCAGGAAACCTCAGACATGTTTCCTAGTTTCAGTTC24390.4425091849231188No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT23830.43234907243615905No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC21340.38717285798521345No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCCTGGGTGAGAAATGATG21270.3859028439243435No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC21010.38118564884111217No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA17100.31024629201251874No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT16920.3069805415702817No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA16520.29972331836531046No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT16060.29137751167959364No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGGCAACAGA15920.2888374835578537No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCGGGACTTCAGTTGACTATAAG14070.25527282623486186No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCACATAGAGAATTAGCGGAGAGTG13170.23894407402367668No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACATGGTGGG13170.23894407402367668No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT12980.23549689300131535No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCTGAGGAATTCTTGCCA12950.23495260126094256No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGACATGGTGGGTGCCTGATTGTT12810.2324125731392026No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG12080.21916814079013017No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCAAGTCTCTGCTAC11760.2133623622261532No Hit
CATAGACCCTTAGAGTTTCAGCCTCCACACTGACGACATGGTGGGTGCCT11490.20846373656279765No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG11480.2082823059826734No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCCATGAGACC11450.20773801424230054No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA10850.19685217943484373No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGTTAC10720.1944935818932281No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT10650.19322356783235814No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTCCAGCTGCTTTTCTCTTCTTG10520.1908649702907425No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCAAGCGTCCGCAGT9670.1754433709801787No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTGTTACAACCAATGCTCTT9430.171089037057196No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT8960.16256179979135482No Hit
CATAGAATGCAGGAGAATATACACAGGTTTCCTGGGCAACAGAACAACAA8690.15766317412799927No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG8530.1547602848460108No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGGGACATGGATGAAGCTG8530.1547602848460108No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTAGAACCCAAAGAGTGAGCCCTTG8320.15095024266340093No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCCATGAGACC8280.1502245203429038No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGACATGGATGAAGCTGGAT8260.14986165918265523No Hit
CATAGATCATGGGACTTCAGCATGGCGGGTGCCTGATTGTTCTATGAGAC8180.14841021454166098No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTTTATGAGAC7980.1447816029391754No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAAGAGTGAGCCCTTGTCCCTTTCT7860.14260443597768405No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT7680.13933868553544698No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT7490.13589150451308568No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACCCAAAGAGTGAGCCCTTGTCCC7380.1338957681317186No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATAGAACCCAAAGAGTGAGCCCT7350.13335147639134576No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC7220.13099287884973013No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACATAGAACCCAAAGAGTGAGCC7050.12790855898761735No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG6400.11611557127953916No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGAACCCAAAGAGTGAGCCCTTGTC6400.11611557127953916No Hit
CATAGATTCTCCCTTGTGCTTTTGGTAGACTTGGGCAACAGAACAACAAC6310.11448269605842064No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCAGTCTCAAACGTTGTG6070.11012836213543792No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG5950.10795119517394657No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGGGACATGGATGA5850.10613688937270377No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)