FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808408

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808408
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144719
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4280729.579391786842084No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC58134.0167497011449775No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT35632.4620125899156298No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC30702.121352413988488No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA28351.9589687601489782No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA25271.7461425244784718No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA22891.58168588782399No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA22801.5754669393790726No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA21861.5105134778432687No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT20271.400645388649728No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA16661.151196456581375No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA15391.063440184080874No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA14901.029581464769657No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC12900.8913826104381595No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA11640.804317332209316No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA11500.794643412406111No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT11060.7642396644531817No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT10410.719325036795445No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT10030.6930672544724604No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG9340.6453886497280937No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT7510.5189366980147735No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG6560.4532922422073121No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG6310.4360173854158749No Hit
CATAGATCATGGGACTTCAGCATGGCTATTCTATGAGACAAGTCTCTGCT5880.40630463173460296No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT5810.4014676718330005No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG5700.39386673484476814No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC5540.3828108264982483No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA5190.35862602699023627No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA4560.31509338787581453No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA3650.2522129091549831No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGAGCTGCCTTCCTAACCATGGGCA3640.2515219148833256No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA3530.24392097789509323No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG3530.24392097789509323No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC3490.24115700080846328No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT3480.2404660065368058No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAATA3400.2349380523635459No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA2850.19693336742238407No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT2720.18795044189083673No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT2630.18173149344591935No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCGTCTCTA2570.1775855278159744No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT2540.17551254500100194No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA2510.17343956218602946No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA2500.172748567914372No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG2460.16998459082774203No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG2450.16929359655608456No Hit
CATAGATTGGAACTTTGCCAGCCTTACCATTTTCCCCCAAGTCATCTATG2440.16860260228442708No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACCAAAACAGAGATATAG2430.16791160801276958No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT2290.15823768820956474No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG2280.15754669393790727No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTAAAACCCTGTCTCTA2280.15754669393790727No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2280.15754669393790727No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA2250.1554737111229348No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2160.1492547626780174No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG2150.1485637684063599No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2120.14649078559138745No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT2090.144417802776415No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACCAT2070.14303581423310002No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCTGTCTCTA2020.13958084287481257No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA2000.1381988543314976No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACAGAGAAACCCTGTCTCTA1910.1319799058865802No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1900.13128891161492273No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGTGG1880.12990692307160775No Hit
CATAGATCATGGGACTTCAGCATGGCCAAAACGGTGAAACTCTGTCTCTA1840.12714294598497777No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA1830.1264519517133203No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1800.12437896889834782No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA1790.12368797462669034No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC1750.1209239975400604No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCATCTCTAC1710.11816002045343044No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1670.11539604336680048No Hit
CATAGATCATGGGACTTCAGCATGGCCAACAAGGTGAAACCTCATCTCTA1640.11332306055182803No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTCATCTCTACTAAAAATA1580.10917709492188311No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA1540.10641311783525313No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTTGCGTTTTTAGTAGAG1530.10572212356359566No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCCCTA1490.10295814647696572No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA1480.10226715220530821No Hit
CATAGATCATGGGACTTCAGCATGGCAAGACCCCATCTCTACAAAAGAAA1470.10157615793365074No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT1460.10088516366199324No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1450.10019416939033576No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)