FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808411

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808411
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences256332
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6967127.17998533152318No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG153065.971162398764103No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG114214.455549833809279No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC96103.749044208292371No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT78743.071797512600846No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG65112.5400652279075575No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG62852.451898319367071No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA60402.356319148604154No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA37791.47425994413495No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT36741.4332974423794143No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG33361.3014371986330229No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGAGACTTGGCCTCAGTTTCCCCT23860.9308240875115085No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT23070.900004681428772No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG22020.8590421796732364No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT18200.7100166970959536No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG17280.6741257431768175No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC15160.5914205015370692No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC14720.5742552627061779No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT14450.5637220479690401No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA12790.4989622832888597No Hit
CATAGAGGGGAGACACTGGCTATAAGAAATACCTGGGCGACCTCTCTATG12540.48920930668039886No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG12100.47204406784950764No Hit
CATAGATGTGAGCACTACTGATAATCCCTGAGACACTGGGGGCACAAAGT12090.47165394878516925No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG11980.4673626390774464No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA11670.4552689480829549No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTTTTAAAATGAGCACCT10840.4228890657428647No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA9600.37451430176489864No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA9230.36007989638437654No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG9070.3538379913549615No Hit
CATAGATGATGTGAAAAGGACCCATGGCTGAGAGAAAACTACCCCAGGCT8600.335502395331055No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACACC8510.3319913237520091No Hit
CATAGATGATGTGAAAAGGACCCATGGTGGTTCTACCTAGTGATTACCTG7850.30624346550567233No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA7840.3058533464413339No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT7630.29766084609022675No Hit
CATAGACTGGCGGTGATTGCTTTCCTGACTTGGCCTCAGTTTCCCCTCCT7610.29688060796154986No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG6990.2726932259725668No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC6910.26957227345785933No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTGACTTGGCCTCAGTTTCCCC6780.2645007256214597No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACAACACAGGATCCAGGTGTC6750.2633303684284444No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC6540.25513786807733724No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT6230.24304417708284567No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAGGCCTGTGTTCTTTGCATGAT6200.24187381988983037No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGATGTGGCATGGAGAA6190.24148370082549192No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG6070.2368022720534307No Hit
CATAGACCAGCTTTGCATGAGTGTGGGCGAAAGTGATCAGAAGCTCTATG5900.2301702479596773No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT5900.2301702479596773No Hit
CATAGATGTGAGCACTACTGATAATCCCTCTTGGCCTCAGTTTCCCCTCC5500.21456548538613984No Hit
CATAGATGATGTGAAAAGGACCCATGGCTCATAGATGATGTGGCATGGAG5480.21378524725746295No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA5240.20442238971334054No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACGGTAGCAAAGCTGCTA5110.19935084187694083No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA5070.1977903656195871No Hit
CATAGATGATGTGAAAAGGACCCATGGTCTATGTGTGATGTGGCATGGAG5060.19740024655524865No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA4990.19466941310487962No Hit
CATAGATGACCTGTTAATCTGCCCCCGTACACCTAGTGATTACCTGGGTG4770.186086793689434No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC4510.17594369801663468No Hit
CATAGATGATGTGAAAAGGACCCATGGTCATAGATGATGTGGCATGGAGA4420.17243262643758875No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA4320.16853143579420438No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATAGCGAGACTCTAT4190.16345988795780472No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT4140.16150929263611255No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG3920.15292667322066694No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAGCCATGCTGAAGTCCCATGAT3900.15214643509199008No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGAGACACTGGGGGCACAAAGT3850.15019583977029788No Hit
CATAGACCAGCTTTGCATGAGTGTGGGGAAGTAGGGAATGATTACAAGTT3720.14512429193389823No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA3650.14239345848352916No Hit
CATAGAGTGGGGGACTAGCATTGATTGAGAGAAAACTACCCCAGGCTCTA3540.13810214877580637No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA3470.13537131532543734No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA3300.1287392912316839No Hit
CATAGACTTCTGTTTGGTCACATGCTCAGTGTATGAATGTTGGAGAGGCA3280.12795905310300704No Hit
CATAGACACACCCAACTCTGCTCAGTGTAGAAATACCTGGGCGACCTCTC3260.12717881497433015No Hit
CATAGATGACCTGTTAATCTGCCCCCAGGCGCTCATTAAAACAGCATGTT3210.12522821965263797No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA3190.12444798152396112No Hit
CATAGATGACCTGTTAATCTGCCCCCAGATCACAGAGTGGCCTTGGGCAA3090.12054679088057677No Hit
CATAGATTAGGGGTGACGGACTAGCCCAGGCTCTATGTGTAGAACCATGT2990.1166456002371924No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA2860.11157405240079271No Hit
CATAGATGGTGGGTTCTGGAGAGAGCACACTGATGAATGTTGGAGAGGCA2820.11001357614343898No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2780.10845309988608523No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2720.10611238550005463No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGATGTGGCATGGAGAAGGGTC2710.10572226643571618No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2700.10533214737137775No Hit
CATAGACCAAACACAGAAGACATGGCAGACACTGGGGGCACAAAGTTCTA2690.1049420283070393No Hit
CATAGATGACCTGTTAATCTGCCCCCGTACCATCAATTTAAGGTAGGCAC2670.10416179017836244No Hit
CATAGATCCACTGTGCTATCTCTGACACCGTAGGGAAGTAGGGAATGATT2660.103771671114024No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA2640.10299143298534712No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)