FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808414

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808414
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences756502
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG9657412.765861821911905No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA663788.774332387753105No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC443505.862509286161834No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC380115.024573629679763No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC285013.767471863921047No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG208072.7504223386058464No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA189052.4990019854541035No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT180442.3851886710147494No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG177472.3459290259642405No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG140511.8573645542245758No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA133491.7645690295597367No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA125301.6563075841174248No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC122751.6225998080639576No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC87241.1532025030997934No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT87191.1525415663144314No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT79571.0518148002252472No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT73950.9775255055505472No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTATAGAGGCCTGAGATTGCTGCTA66260.875873427961856No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA65340.8637121911111934No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG64810.8567062611863552No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC63220.8356884714118403No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT62850.8307975392001608No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC62350.8241881713465398No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGACTTCAGTTGACTATAAGAA53550.70786329712281No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACTTCAGTTGACTATAAG50380.6659599049308528No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT50290.664770218717201No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT42990.5682734480543343No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG42280.5588881457021924No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTAGCTTGGGTGACAGAG37540.4962313384498653No Hit
CATAGAGGGTGTTTTTCGGTGTCACACCTTGGGACCATGCTCACACCTTG37510.49583477637864803No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC35700.47190886474854No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT35490.4691329302500192No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGACATGGATGAAGCTGGAT34620.45763263018471867No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC34280.45313826004425634No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG32840.4341032806258278No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA31820.4206201702044409No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTCAGACATGTTTCCTAGTTTCA28800.38069958836857004No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC25680.339457132961975No Hit
CATAGATCTGTGGCTCCCGATAAATGTCTTGTGCTCATACAGAATTAGAT25370.33535932489272996No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC24950.32980745589568833No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC24260.32068652825769134No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG23790.3144737224752876No Hit
CATAGAACAAGGCCAGAATTACCCTGGAGGCAGTCTCAAACGTTGTGTCT23010.3041631086236388No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT22080.2918696844159037No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTAGAGAATTAGCGGAGAGTGA21320.2818234452783998No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG20770.27455314063941666No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACATGGTGGG20100.26569658771556454No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT18960.2506272290093086No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT18180.24031661515765984No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA17760.2347647461606182No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA17240.22789100359285236No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCGACATGGTGGGTGCCTGATT16940.22392538288067976No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG16530.21850570124071056No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGACTCTT15780.20859164946027903No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTTGGGTGACAGAGTGAGTCTATG14290.18889573325648842No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGACATGGATGAAGC14070.18598761140089518No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTAGAACCCAAAGAGTGAGCCCTTG13370.17673449640582575No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCCATGAGACC11780.15571670663131093No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG11610.15346952156107982No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACCAGCAGAATCAGGGTTGGT10920.14434859392308283No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT10870.14368765713772072No Hit
CATAGAGAATTTGCACACCACGGGACACGGATGAAGCTGGATCTATGAGA10750.14210140885285166No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGGTCTTACTCTTCCCGTCTATGAG10480.13853235021189633No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT10380.13721047664117214No Hit
CATAGATCTGTGGCTCCCGATAAATGTCGTCAGTGTGGGCAACAGAACAA9820.12980798464511661No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCCATGAGACC9720.1284861110743924No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATAGAACCCAAAGAGTGAGCCCT9600.12689986278952337No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT9430.12465267771929221No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGGGCAACAGAACAACAACA8600.11368112708228133No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGAACCCAAAGAGTGAGCCCTTGTC8600.11368112708228133No Hit
CATAGAGAATTTGCACACCACGGGACAGGGATGAAGCTGGATCTATGAGA8520.11262362822570199No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAAGAGTGAGCCCTTGTCCCTTTCT8500.11235925351155715No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT8270.10931894429889147No Hit
CATAGAACAATGTAATAAGCATCGGAGGAGCTGAGATGGGAGGATCCCTT8270.10931894429889147No Hit
CATAGAGAAGAGAAGGCGACAATGGCACACTGACGACATGGTGGGTGCCT8180.1081292580852397No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT8090.10693957187158792No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTGCTACCGTACCCCCAGTA7980.10548551094379129No Hit
CATAGATCATGGGACTTCAGCATGGCCACTGAGGAATTCTTGCCAGGGAT7940.10495676151550161No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACATAGAACCCAAAGAGTGAGCC7810.10323832587356015No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)