FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808416

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808416
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences176750
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT107986.1091937765205095No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG88144.986704384724186No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA80104.5318246110325315No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA72664.110891089108911No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG71964.071287128712871No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA60873.4438472418670436No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG45842.5934936350777935No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT45262.5606789250353605No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA40292.2794908062234795No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA39692.2455445544554453No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG39102.212164073550212No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC34851.9717114568599716No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT29521.6701555869872702No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA28661.6214992927864214No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA25131.421782178217822No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT21501.2164073550212162No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG20001.1315417256011315No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA19601.1089108910891088No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC19591.1083451202263084No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA16630.9408769448373409No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA14560.8237623762376238No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT14100.7977369165487977No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT14080.7966053748231967No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA12840.7264497878359265No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT12830.7258840169731259No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA12770.7224893917963225No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA11890.6727015558698727No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATAGAACAGCTAAAAATCT11530.6523338048090523No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC11510.6512022630834512No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGACCAAAGCTAGAAACTCCCAT11440.6472418670438472No Hit
CATAGACCCCATGTGCAGTGTAAGCTAATGTACAGGTGCAAATTGTCAGT11190.633097595473833No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG10380.5872701555869873No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA10290.5821782178217821No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT10270.581046676096181No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG10160.5748231966053748No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG9440.534087694483734No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC9080.5137199434229137No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG8860.5012729844413013No Hit
CATAGATGTGGTCTCAGTGCCCTATGTCGTCATTGGGGATGGCTGGTTGA7990.45205091937765207No Hit
CATAGATGTGCCACATACCTTTCCCATCTAGCAAACTAACACAGAAACAG7810.44186704384724185No Hit
CATAGAAGGAGCTGGACTGGATGGACCAAGACATGTGTGAGAGGGAAGGA7770.43960396039603955No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAGGGTGGGGAAAGAGAGCACTCTA7570.4282885431400283No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT7190.4067892503536068No Hit
CATAGACCTGTGTGTGAGGCATTGTTATAGAGAACAGCTAAAAATCTTGG6880.3892503536067893No Hit
CATAGACGGGCCAGAGAATAGTGCTAGTACACATAGAACAGCTAAAAATC6850.38755304101838756No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG6660.3768033946251768No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA6470.36605374823196607No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT6430.36379066478076383No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT6380.36096181046676096No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA6330.35813295615275814No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACAGTGAAACAAGATCGTGC6320.35756718528995757No Hit
CATAGACCTGTGTGTGAGGCATTGTTATGGTTCTACACATAGAGACATGT6010.34002828854314004No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA5820.3292786421499293No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT5470.3094766619519095No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA5150.29137199434229133No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGCTGAGATTGGCCTGTGT5010.28345120226308346No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT4900.2772277227722772No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG4880.2760961810466761No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA4870.27553041018387553No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT4740.2681753889674682No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGAACAGCTAAAAATCTTGGA4710.26647807637906645No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGAACAGCTAAAAATCTTGGAGC4690.26534653465346536No Hit
CATAGATGTGCCACATACCTTTCCCACCACACGCACAACTGGCATCTGGT4630.2619519094766619No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT4590.2596888260254597No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACTCCCTCATTATCCCTGTGC4530.2562942008486563No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAACAGCTAAAAATCTTGGAGCT4410.2495049504950495No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG4410.2495049504950495No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG4350.24611032531824611No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA4290.24271570014144273No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC4190.23705799151343704No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGTCATTCTTCTCTGGGGGCTCT4190.23705799151343704No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT4180.23649222065063646No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG4150.2347949080622348No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC4070.23026874115983026No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG4060.22970297029702968No Hit
CATAGAATACAACACACTCTCTGCCCTGTACGGAGATAGAGAGGTTGGTT3940.2229137199434229No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA3840.21725601131541727No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG3820.21612446958981613No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGGCAAACTAACAC3730.211032531824611No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA3700.20933521923620935No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT3500.19801980198019803No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAATTTGCAAATACA3500.19801980198019803No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG3390.1917963224893918No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA3370.19066478076379068No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG3310.18727015558698729No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA3150.17821782178217824No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTAGAACATTAG3150.17821782178217824No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT3080.17425742574257427No Hit
CATAGATGATCCATCTACCTCTGCTTCACACGGACTACAAGTACCCACCA2990.16916548797736916No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTAGGGTGGGGAAAGAGAG2780.15728429985855727No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGGCAAACTAACACA2750.15558698727015557No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA2720.15388967468175388No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCTCCCTCATTATCCCTG2700.15275813295615276No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2660.1504950495049505No Hit
CATAGAATACAACACACTCTCTGCCCTGTGATATGTCTGCTGAGATTGGC2610.14766619519094765No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC2600.1471004243281471No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATGAGACCAAGCAGGTG2570.1454031117397454No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACAGGGTAATGGAGGAGTATGGG2440.13804809052333805No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGAGAGGAGGGGGCAGAATATC2440.13804809052333805No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACACATAGACAGCTAGGGTGG2440.13804809052333805No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCACTGACGACATGCAGCAA2390.1352192362093352No Hit
CATAGATGATCCATCTACCTCTGCTTCATGCACATCTACAAGGACACTCA2350.13295615275813294No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA2280.128995756718529No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG2230.12616690240452616No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTACCGAATTGGGGATGGCTGG2220.12560113154172559No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGTGGGAGAGGAGG2200.12446958981612447No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCGAGGCAGAGGACAGGTATCT2190.12390381895332389No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA2170.12277227722772277No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATGGTTCTACACATAGAGAACAG2140.12107496463932108No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG2140.12107496463932108No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGTGTGAGAG2120.11994342291371995No Hit
CATAGATGCTTCTGATATGTTGCCGTACTCCCTCATTATCCCTGTGCCTC2110.11937765205091938No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGAGGGTAA2030.11485148514851484No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2020.1142857142857143No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTGGAGACAGCCG2020.1142857142857143No Hit
CATAGATGATCCATCTACCTCTGCTTCAACACGGACTACAAGTACCCACC1940.10975954738330976No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTCAGTTGTGTGTGTGGTCTATGA1930.10919377652050918No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGCTACCGTAGTTGCCTTTCCT1920.10862800565770864No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC1920.10862800565770864No Hit
CATAGACAGCTGGGGTGGGAGGTTAGTACACATAGATGTGCCTCTTGTAG1900.10749646393210749No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG1900.10749646393210749No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCATAGACCAAAGCTAGAAACT1880.10636492220650637No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTACGGTAGCACAACTGGCATCTGG1870.1057991513437058No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT1800.10183875530410183No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)