FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808417

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808417
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences176750
Sequences flagged as poor quality0
Sequence length150
%GC35

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT106546.027722772277228No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA86414.8888260254596885No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT79614.504101838755304No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA73274.145403111739745No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG71874.066195190947666No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA60603.428571428571429No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG45892.596322489391796No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT45332.5646393210749645No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT40352.282885431400283No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA39202.2178217821782176No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG38592.183309759547383No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA34861.9722772277227723No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT29651.6775106082036775No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA28741.626025459688826No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA25081.418953323903819No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT21651.2248939179632248No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG19711.115134370579915No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA19641.111173974540311No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC19471.1015558698727015No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA16760.9482319660537482No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT14380.8135785007072136No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT14060.7954738330975955No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT14000.7920792079207921No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA12840.7264497878359265No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT12830.7258840169731259No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA12740.7207920792079209No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA11820.6687411598302687No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC11430.6466760961810467No Hit
CATAGACACACTGACAATTTGCACCTGTACATTAGCTTACACTGCACATG11390.6444130127298444No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGGCAACATATCAGAAGCAT11390.6444130127298444No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATTCTGTTTACTCGGAGATTT11350.6421499292786421No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC10450.5912305516265912No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT10370.5867043847241866No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA10010.5663366336633663No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG9900.5601131541725601No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA9170.5188118811881188No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC9140.517114568599717No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC8800.49787835926449786No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTGGTCCATCCAGTCCAGCTCC7810.44186704384724185No Hit
CATAGATTCAACCAGCCATCCCCAATGACGACATAGGGCACTGAGACCAC7750.4384724186704385No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTTGCTCCTTCTCACACAAATCTA7620.4311173974540311No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAGATGGGAAAGGTATGT7610.4305516265912306No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC7210.40792079207920795No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATAACAATGCCTCACACAC6960.39377652050919376No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTACTAGCACTATTCTC6840.386987270155587No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC6690.37850070721357854No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT6450.3649222065063649No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT6410.3626591230551627No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA6390.36152758132956153No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC6360.35983026874115986No Hit
CATAGAGGCACGATCTTGTTTCACTGTGATCTACAGTTTCAATACTATGC6240.3530410183875531No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTCTATGTGTAGAACCATAACAA6100.34512022630834516No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT5780.327015558698727No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT5370.3038189533239038No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG5070.28684582743988685No Hit
CATAGACACAGGCCAATCTCAGCAGAGGAGAATGATATTGTTGCAGATTT5010.28345120226308346No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA4900.2772277227722772No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT4890.2766619519094766No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG4870.27553041018387553No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT4680.2647807637906648No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGGTGGGAAAGGTATGTGGCA4640.2625176803394625No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGGAGGAGCTGACTTACT4610.2608203677510608No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACCCCAGGTAGCAAAACAGAG4600.26025459688826025No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT4600.26025459688826025No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGGCAACATATCAGAAGCAT4480.25346534653465347No Hit
CATAGAGGCACAGGGATAATGAGGGAGTACGATAGCGAGAAGAGTGGAGG4460.2523338048090523No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT4400.24893917963224893No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC4350.24611032531824611No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA4310.24384724186704382No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC4230.23932107496463934No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA4190.23705799151343704No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT4160.23536067892503537No Hit
CATAGAGCCCCCAGAGAAGAATGACCTACGGCAACATATCAGAAGCATCT4150.2347949080622348No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGATAGCGAGAAGAGTGGAGGC4020.22743988684582744No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3970.22461103253182463No Hit
CATAGAACCAACCTCTCTATCTCCGTACAGGGCAGAGAGTGTGTTGTATT3930.22234794908062233No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC3790.2144271570014144No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA3750.21216407355021216No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA3730.211032531824611No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCCATAGACTCTGTTTACTC3680.2082036775106082No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT3540.20028288543140027No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCTCCAAGGAAACATTGGA3510.1985855728429986No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA3310.18727015558698729No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3280.1855728429985856No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT3150.17821782178217824No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACGGTAGCAGAGACCT3100.1753889674681754No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG3080.17425742574257427No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC2980.16859971711456861No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGAAGCAGAGGTAGATGGAT2890.1635077793493635No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2850.16124469589816123No Hit
CATAGAGGCACAGGGATAATGAGGGAGAGAAGTGTATTAATTATCTATGG2800.15841584158415842No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT2790.15785007072135784No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGAAGTGTATTAATTATCTATGGC2770.15671852899575672No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCCTCATAGAGGAGAATGAT2690.15219236209335218No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA2630.1487977369165488No Hit
CATAGACACAGGCCAATCTCAGCAGACATATCACAGGGCAGAGAGTGTGT2610.14766619519094765No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2570.1454031117397454No Hit
CATAGACACACTGACAATTTGCACCTGCTTGGTCTCATAGAAGTGTATTA2480.1403111739745403No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGAAGACACAGCACACTCTTC2480.1403111739745403No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGGCATTCTCTCAGGGCTGTT2450.1386138613861386No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATGAAGCAGAGGTAGATGGATCA2330.13182461103253182No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCTGTCTATGTGTATATCTAGGA2330.13182461103253182No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATGTCGTCAGTGGAGGAGAATGAT2310.1306930693069307No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA2280.128995756718529No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA2170.12277227722772277No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGGCAT2160.1222065063649222No Hit
CATAGATATTCTGCCCCCTCCTCTCCCACATAGACTCTGTTTACTCGGAG2130.1205091937765205No Hit
CATAGATTCAACCAGCCATCCCCAATTCGGTAAGGAATCTTTGGGAGGCT2120.11994342291371995No Hit
CATAGAGGCACAGGGATAATGAGGGAGTACGGCAACATATCAGAAGCATC2120.11994342291371995No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA2110.11937765205091938No Hit
CATAGATACCTGTCCTCTGCCTCGAGGTCACTGACAGGTCTTAAAGCTCT2080.11768033946251769No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCAGGGCAGAGAGTG2080.11768033946251769No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA2050.11598302687411599No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAAATACAAAACTTATCTGGGCA2040.11541725601131542No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1990.1125884016973126No Hit
CATAGATCCCATACTCCTCCATTACCCTCTTGGTCTCATAGAGGAGAATG1970.11145685997171145No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA1950.11032531824611033No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTACGGTAGCAGGAAACATTGGA1940.10975954738330976No Hit
CATAGACCACACACACAACTGAGAGGAGGAGCTGACTTACTGTTCTATGT1930.10919377652050918No Hit
CATAGACCATCCCTTCTACAAGAGGCACATCTATGTGTACTAACCTCCCA1900.10749646393210749No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGAGGAATCTTTGGGAGGCTA1860.10523338048090525No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCAGTCCAGTCCATCCAGTCCA1850.10466760961810467No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGATAGCGAGAAGAGTGGAGGC1840.1041018387553041No Hit
CATAGATCACCAGATGCCAGTTGTGCTACCGTAAGGAGGAGCTGACTTAC1820.10297029702970298No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG1810.1024045261669024No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)