FastQCFastQC Report
Wed 8 May 2024
EGAF00005808419

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808419
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences195685
Total Bases29.3 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4191821.421161560671486No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT135436.920816618545111No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG104545.342259243171423No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTGCCATACCAAGAATAAG70653.610394256074814No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG68993.5255640442547973No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG65673.355903620614763No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA61423.1387178373406237No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG60363.0845491478651916No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA58262.977233819659146No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT56732.8990469376804557No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT48462.476428954697601No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG37111.8964151570125456No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA35591.8187393004062653No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT30851.5765132738840484No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT28371.4497789815264328No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGTCAGAAGCTTTGAGAT24651.2596775429900093No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT16220.8288831540485986No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT15330.7834018959041317No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA14530.7425198661113525No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT14190.7251450034494212No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC13260.6776196438153155No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG12600.6438919692362726No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG12240.6254950558295219No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGGGTAATTCTGGCCTTGTTCTAT11770.6014768633262642No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC10720.5478191992232415No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA10130.5176687022510668No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG10100.5161356261338376No Hit
CATAGACTCACTCTGTCACCCAAGCTACTCCTCTTCTTCCTCCTCCTGTC9980.5100033216649207No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT9970.5094922962925109No Hit
CATAGAGGGCTATCCTTGCTCAGATCACATTTATCGGGAGCCACAGATCT9340.47729769783069725No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT7560.38633518154176355No Hit
CATAGAGGGCTATCCTTGCTCAGATCATGGTGGGAGTATACTGATAGCTC7410.3786698009556175No Hit
CATAGAGATCTTCTCGGCTTAGCGGCGAGGTTTCCTGGGCATCAAGTCTA6820.3485193039834428No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAACTATGGCTTAATGTTTC6710.34289802488693566No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT6030.3081482995630733No Hit
CATAGACAAGCCTGCCAAGACCTCTCCTCTTCTTCCTCCTCCTGTCTATG5850.29894984285969795No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG5650.2887293354115032No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT5480.28004190408053764No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC5400.2759537011012597No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA4800.24529217875667525No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCACACATTTATCGGGAGCCACAGA4650.23762679817052917No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA4620.23609372205329995No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC4520.23098346832920255No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGGTAAACAAACTTCTGGC4460.22791731609474408No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGCTGAAACTCTAAGGGTCT4360.2228070623706467No Hit
CATAGAGCCATCATCATTTCTCACCCAGACACTGAAACATTTTCTGGTCA4170.21309758029486162No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG3970.20287707284666687No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGGCCATTGTCGCCTTC3910.1998109206122084No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACGTGGTGTTTGGG3700.18907938779160385No Hit
CATAGACACAACGTTTGAGACTGCCTGATCCCTGTGCAAAATTCTCTTGA3540.180902981833048No Hit
CATAGACGGGAAGAGTAAGACCACCCATTAGGTCCTCTTCTTCCTCCTCC3310.16914939826762398No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC3270.16710529677798502No Hit
CATAGACACAACGTTTGAGACTGCCTAATCAGGCACCCACCAAAAGCACA3240.1655722206607558No Hit
CATAGAGAAGCTTTGAGATTTGTGTCTGTTCTATGTGTAGAACCATGTCG3200.16352811917111684No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT3190.1630170937987071No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA3160.16148401768147788No Hit
CATAGATAGCAGCAATCTCAGGCCTCTATAGGTAAACAAACTTCTGGCCC3110.15892889081942918No Hit
CATAGACTCACTCTGTCACCCAAGCTGGGCGTGGTGGCTCATGCCTGGAA2830.14462018039195645No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT2700.13797685055062986No Hit
CATAGAGGGCTATCCTTGCTCAGATCATACGGTAGCAGAAGCTTTGAGAT2680.13695479980581038No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGTAATTCTGGCCTTGTTCTATGTG2660.13593274906099087No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC2650.13542172368858113No Hit
CATAGAACAATCAGGCACCCACCATGTGACACCGAAAAACACCCTCTATG2470.12622326698520583No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC2440.12469019086797659No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT2210.11293660730255256No Hit
CATAGAGGTGAGCGGCTGTCTCCATAGAGGCAAGGGTACTATTTTGATTC2200.11242558193014283No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2150.10987045506809412No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGAAGGAGGCTGAAACTCTA2140.1093594296956844No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)