FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808420

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808420
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences214974
Sequences flagged as poor quality0
Sequence length150
%GC34

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC112965.254588927033037No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA104714.870821587726888No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC88914.135848986389052No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA83963.9055885828053625No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA70823.2943518751104786No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT62012.884534873984761No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA61182.8459255537879002No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA54282.5249565063682122No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA52572.4454120033120286No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA49852.3188850744741223No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG46592.1672388288816324No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA45612.1216519206973867No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT40011.8611553025016978No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT33301.5490245331993637No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA32201.4978555546252106No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG28701.335045168252905No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG28491.3252765450705666No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT27001.2559658377292138No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA25041.1647920213607226No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA25001.1629313312307534No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT24461.1378120144761692No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC23071.0731530324597394No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT22941.0671057895373395No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG21911.0191930186906324No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC21661.0075637053783248No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC19240.8949919525151879No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT16860.7842808897820202No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA14410.6703136193214063No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT13840.6437987849693451No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT13000.6047242922399918No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC12890.5996073943825765No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC12710.5912342887977151No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG11900.5535553136658387No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11730.5456473806134695No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG11460.5330877222361774No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG10890.5065728878841163No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA10720.49866495483174705No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT10580.4921525393768549No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT10250.47680184580460894No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCATGAGGTTCTTCAACACAGCT10230.47587150073962436No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATTGGTGAAAAGTAGGGGACAGT9860.45866011703740917No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG9810.4563342543749477No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA9300.43261045521784025No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGCACATTATTATTGGTTGGTTC8670.4033045856708253No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT8600.40004837794337916No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA8520.39632699768344076No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG8500.3953966526184562No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAGGATGACTTATGGAA8320.38702354703359476No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA8100.37678975131876413No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT7980.37120768092885653No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT7670.3567873324215952No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA6990.32515560021211865No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG6930.3223645650171649No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA6660.3098049066398727No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT6660.3098049066398727No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATCCATCAGAGCATCACCCC6630.3084093890423958No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA6630.3084093890423958No Hit
CATAGACCCACTTACACACACAGGTTTACACTGACGACAATGGGCACACT5960.2772428293654116No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA5880.2735214491054732No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA5790.2693348963130425No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA5590.26003144566319647No Hit
CATAGATCATGAATGACTCCCACTCTGACACTGACGACAATGGGCACACT5490.2553797203382735No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC5290.24607626968842744No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCAAGGTGTACAGCCTACATCC5290.24607626968842744No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGGCAAGTGTATGGTCAGTT5260.24468075209095053No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG5210.24235488942848904No Hit
CATAGATCATGGGACTTCAGCATGGCCAGCATGAGAAGAATGGCCTCTAT5030.23398178384362758No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCATCGGCCGCACTGAAATTGTC4740.22049178040135087No Hit
CATAGATGCACCAGAAGCCACCTACCGTATGGTGAAAAGTAGGGGACAGT4500.20932763962153564No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC4470.20793212202405872No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC4390.2042107417641203No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT4360.20281522416664338No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGCCCTGTGATTGTCCTGGTCTAT4160.19351177351679738No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4050.18839487565938207No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGTCACTCAAATATAGACCTCAA4000.18606901299692058No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAGAACAAGGGCATGGTCAAGTGT3940.18327797780196675No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT3900.18141728767199755No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3900.18141728767199755No Hit
CATAGAATTCCCCAATGTCCTGTACAAACCAAACAATAGCCAGTCTATGA3850.17909142500953604No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTCCAGTCTCGGCAACAAG3630.1688576292947054No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT3370.15676314344990558No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG3320.15443728078744406No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT3310.15397210825495175No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA3230.15025072799501335No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG3160.14699452026756724No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT3140.14606417520258264No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3120.14513383013759804No Hit
CATAGATGCACCAGAAGCCACCTACCCCCAAGTATATGACACATTACACC3030.14094727734516732No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC3030.14094727734516732No Hit
CATAGAACTTGTGCTTTTGGTGTCACCACAGCCCAGTTTTCCTTCTCTAT2930.13629555202024432No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGAACAAGGGCATGGTCAAG2900.1349000344227674No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG2840.13210899922781358No Hit
CATAGAATTCCCCAATGTCCTGTGCAAAAGGGCAAGTGTATGGTCAGTTC2760.12838761896787518No Hit
CATAGACAGTCCTGCCGTGTACATGTGCCCTGTGATTGTCCTGGTCTATG2750.1279224464353829No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCCTTAGGAG2680.12466623870793676No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA2600.12094485844799836No Hit
CATAGACCATGTAATACCATCGTGAGCAGACAATGGGCACACTTAACACC2590.12047968591550606No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA2480.11536278805809073No Hit
CATAGACCATGTAATACCATCGTGAGCAGAATTTTGGGGGAAGAGAAACA2450.11396727046061383No Hit
CATAGACCATGTAATACCATCGTGAGCAGCCTACATCCCTCATCTATGAG2370.11024589020067543No Hit
CATAGACCCCCATGCAACCACATCTATAGGATGACTTATGGAATCTGAAG2370.11024589020067543No Hit
CATAGACCATGTAATACCATCGTGAGCAGAATGGCCCCAGCATGAGAAGA2340.10885037260319852No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGGCAAGTGTATGGTCAGTTCT2170.10094243955082939No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTTTGGGGGAAGAGAAACAGAATCT2170.10094243955082939No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)