FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808421

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808421
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences214974
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG116655.426237591522696No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT105584.911291598053718No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT83353.8772130583233326No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG81063.7706885483825956No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT71983.3483118888795858No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT61142.8440648636579304No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT59702.7770800189790394No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT53052.4677402848716588No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT51592.399825095127783No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC50702.358424739735968No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG46772.1756119344664935No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT45702.1258384734898175No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT40161.8681328904890822No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT38861.8076604612650833No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT32051.490877966637826No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG28511.3262068901355513No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG28381.3201596472131514No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT26951.2536399750667524No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT25271.1754909896080457No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT24431.1364164968786923No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC23891.111297180124108No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG22911.0657102719398626No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT22671.0545461311600473No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG21631.006168187780848No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC19720.9173202340748183No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT16810.7819550271195587No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA14060.6540325806841758No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT13930.6479853377617758No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT13790.6414729223068836No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG12830.5968163591876228No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC12800.5954208415901459No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT12790.5949556690576535No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12540.583326355745346No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG11600.5396001376910696No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC11380.529366341976239No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG11030.5130853033390085No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT10400.48377943379199345No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT10370.48238391619451654No Hit
CATAGAATAGCTGTGTTGAAGAACCTCATGCCAAGTAAGTCTACAAAGAA10330.48052322606454734No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT10260.4772670183371013No Hit
CATAGAACTGTCCCCTACTTTTCACCAATAGAACTTTCCCACCGCCCTTT10060.46796356768725517No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG9490.4414487333351941No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA9280.4316801101528557No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC8620.4009787230083638No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT8460.393535962488487No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT8450.3930707899559947No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG8330.3874887195660871No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGCATTCTTTCTCCA8190.3809763041111948No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT7890.3670211281364258No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG7800.3628345753439951No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG6910.32143421995218024No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA6830.31771283969224184No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTTGCAGGATGAATGGGGAC6590.3065486989124266No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6580.3060835263799343No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC6530.3037576637174728No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT5860.27259110404048864No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA5700.26514834352061184No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAAACCTGTGTGTGT5690.2646831709881195No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC5470.25444937527328887No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC5300.24654144222091973No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTCAGAGTGGGAGTCA5290.24607626968842744No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC5200.24188971689599673No Hit
CATAGAACTGACCATACACTTGCCCTTACGGTAGGTGGCTTCTGGTGCAT5190.2414245443635044No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC5160.24002902676602753No Hit
CATAGATGAGGGATGTAGGCTGTACACCTTGGTCTAGGATGAGATAATTG5160.24002902676602753No Hit
CATAGAGGCCATTCTTCTCATGCTGGCCATGCTGAAGTCCCATGATCTAT4950.23026040358368918No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTAGAATCTTGAACTCAGGAGTC4720.21956143533636627No Hit
CATAGAACTGTCCCCTACTTTTCACCATACGGTAGGTGGCTTCTGGTGCA4520.21025798468652024No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA4440.20653660442658184No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC4350.2023500516341511No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG4220.19630280871175118No Hit
CATAGACCAGGACAATCACAGGGCACCAAGGTCAAGGGCAGGGATTCTAT4110.19118591085433587No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA4070.18932522072436667No Hit
CATAGACACTTGACCATGCCCTTGTTCTGACACTTGAAAGCTCCCTGGAT4020.18699935806190518No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTGGATCTCAGAGTTAGCTTG4020.18699935806190518No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3880.18048694260701295No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT3850.17909142500953604No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAGGACATTGGGGAATTCTATGT3790.1763003898145822No Hit
CATAGACTTGTTGCCGAGACTGGAGTACGGTTGCAGGATGAATGGGGACA3510.1632755589047978No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT3320.15443728078744406No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT3280.15257659065747486No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC3260.15164624559249026No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA3140.14606417520258264No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC3090.14373831254012112No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT3090.14373831254012112No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC3030.14094727734516732No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGACACCAAAAGCACAAGTTCTAT2960.1376910696177212No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGTAGGTGGCTTCTGGTG2940.1367607245527366No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGCAATTCTATGTGTAGAACCATGT2930.13629555202024432No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2850.13257417176030592No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGAACTTTCCCACCGCCCT2800.13024830909784438No Hit
CATAGACCAGGACAATCACAGGGCACATGTACACGGCAGGACTGTCTATG2790.1297831365653521No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC2780.12931796403285978No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCACAGGACATTGGGGAATTC2780.12931796403285978No Hit
CATAGACAGGGGCCAGAACTCCTAAGGAGACTTGGTCTCATAGACAGGGG2660.12373589364295216No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGCTCACGATGGTATTACATGG2600.12094485844799836No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA2470.11489761552559843No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAATTCTGCTCACGATGGTATTACA2430.11303692539562923No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG2430.11303692539562923No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTATAGATGTGGTTGCATGGGG2360.10978071766818313No Hit
CATAGAGGCCATTCTTCTCATGCTGGGGCCATTCTGCTCACGATGGTATT2310.10745485500572162No Hit
CATAGATGAGGGATGTAGGCTGCTCACGATGGTATTACATGGTCTATGTG2300.10698968247322932No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2180.10140761208332169No Hit
CATAGAACTGACCATACACTTGCCCTGGATCTCAGAGTTAGCTTGCCTCT2150.10001209448584479No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)