FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808432

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808432
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences601642
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG7976313.257551833149947No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA560939.323318518321527No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC366466.090997636468199No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC264804.401288473876491No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC232953.8719038896885523No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT183293.0464960890363373No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG158402.632794917907992No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG146362.432675910258925No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA124402.0676747966398623No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG116601.9380295923489383No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA95591.5888185997653088No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA83891.3943507933289232No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC80511.3381712048028562No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG79311.3182257887580988No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGGCAGTCTCAAACGTTGTGTCT67641.1242566177228317No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT67381.1199351109131344No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC66721.1089651320885177No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT63801.0604312863796077No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC59750.9931155072285511No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC54590.907350218236094No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG54460.9051894648312452No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT41020.681800805129961No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTAGAGGCCTGAGATTGCTGCTATC37150.617476838385618No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT33280.553152871641275No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT32700.5435125872196422No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC32580.5415180456151665No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTCAGACATGTTTCCTA32010.5320439729939066No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGACTTCAGTTGACTATAAGAA31820.52888594878682No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC31470.5230685357737658No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGACATGGTGGGTGCCTGATTGTT29370.48816405769544013No Hit
CATAGATCTGTGGCTCCCGATAAATGTGTGCTCATACAGAATTAGATCTA28120.46738758264881775No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG27680.4600742634324066No Hit
CATAGACTTGATGCCCAGGAAACCTCTGGGAGAGGCTGTTTGAGATCTAT27560.4580797218279309No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGAATTCTTGCCAGGGATCT26170.43497628157608675No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGACATGGTGGGTGCCTGATTGTTC25570.425003573553708No Hit
CATAGACCCTTAGAGTTTCAGCCTCCTCAGACATGTTTCCTAGTTTCAGT25400.42217797294736736No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCATCTGGGAGAGGCTGTT24580.40854860531678305No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACTGACGACATGGTGGGTGCCTGA24250.40306361590447476No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC22910.3807912346544955No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC22740.3779656340481549No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA22660.37663593964517106No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA19220.3194590803168662No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC18960.3151375735071687No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTACCGTAGCTGCTTTTCTC18330.304666230083671No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCAGCAGAATCAGGGTTGGTTCTAT17790.2956907928635301No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG17630.29303140405756245No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC17310.2877126264456271No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGACATGGATGAAGC17270.2870477792441352No Hit
CATAGAACAAGGCCAGAATTACCCTGGAGACAGCCGCTCACCTCTATGAG16600.2759115886191456No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT15880.2639443389922911No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTCAGACATGTTTCCTAGTT15780.2622822209885613No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA15310.25447026637103126No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGGGACATGGATGAAGCTGG14830.24649209995312826No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTATGGGCAACAGAA14630.2431678639456687No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT14280.2373504509326144No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG13910.23120061431881417No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG12530.20826338586734305No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT11590.192639476632283No Hit
CATAGAGGGTGTTTTTCGGTGTCACATGGTGGGTGCCTGATTGTTCTATG11260.18715448721997466No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGTTACAACCAATGCTCTTTCATCT10550.17535344939349312No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG9800.1628875643655197No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAAGAGTGAGCCCTTGTCCCTTTCT9740.16189029356328183No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCCATGAGACC9670.16072681096067096No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACATGGTGGG9660.16056059916029797No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT9500.1579012103543303No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT9130.15175137374053008No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT9010.14975683213605434No Hit
CATAGACAGGAGGAGGAAGAAGAGGATCTATCGGGACATGGATGAAGCTG8960.14892577313418942No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG8890.14776229053157858No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA8420.13995033591404854No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT8210.13645988810621598No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTAGAACCCAAAGAGTGAGCCCTTG8100.1346315583021132No Hit
CATAGAGCTATCAGTATACTCCCACCATGGTGGGTGCCTGATTGTTCTAT7610.12648718008383722No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGACATGGATGAAGCTGGAT7480.12432642667898851No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGCAGTCTCAAACGTTGTGTCTATG6970.11584962485996655No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATAGAACCCAAAGAGTGAGCCCT6840.11368887145511782No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG6800.11302402425362591No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGAACCCAAAGAGTGAGCCCTTGTC6710.1115281180502691No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCCATGAGACC6700.11136190624989613No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT6690.11119569444952315No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGGGACATGGATGAAGC6580.10936736464542036No Hit
CATAGATTCTCCCTTGTGCTTTTGGTTGACATGGTGGGTGCCTGATTGTT6560.10903494104467441No Hit
CATAGACAGGAGGAGGAAGAAGAGGATTGCTTGAGCCCAGGAGGTCAAGG6300.10471343423497695No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)