FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808437

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808437
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70434
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG59208.405031660845614No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT51017.242240963171195No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT47276.711247408921828No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG33594.769003606212909No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT26643.7822642473805264No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT26103.7055967288525427No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT19032.701820143680609No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT15992.2702104097452933No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT15772.2389754947894485No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT14552.0657636936706707No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT13861.9677996422182469No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG10991.56032597893063No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG10321.465201465201465No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT9081.2891501263594287No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT8641.2266802964477383No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG7621.0818638725615468No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT7421.0534684953289604No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC7401.0506289576057017No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT6850.9725416702160887No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT6700.951245137291649No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA6580.934207910952097No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG6420.9114916091660277No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC6370.9043927648578811No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT6160.8745776187636654No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG5980.8490217792543374No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT5610.7964903313740523No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA5440.7723542607263537No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTACGGTTGCAGGATGAATGGGG4540.6445750631797144No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC4270.6062413039157225No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT3880.5508703183121788No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG3570.5068574836016696No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG3450.4898202572621177No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT3430.48698071953885913No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC3380.47988187523071246No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3350.4756225686458245No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3310.46994349319930717No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT3300.4685237243376778No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT3170.4500667291364966No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC3130.4443876536899793No Hit
CATAGATGGCCCACTGACATTTTCCTCTGCTTTTACAAACTCAAGTGATT2990.4245108896271687No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2670.37907828605503024No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC2660.3776585171934009No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC2630.37339921060851294No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2620.37197944174688363No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG2520.35778175313059035No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTTTCCCACCGCCCTTTTCT2470.35068290882244374No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2450.34784337109918506No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG2450.34784337109918506No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2380.33790498906777977No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTCATAGATGTGGTTGCATGGGG2290.3251270693131158No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG2240.3180282250049692No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA2200.3123491495584519No Hit
CATAGAACTGTCCCCTACTTTTCACCAAACCTGTGTGTGTAAGTGGGTCT2180.3095096118351932No Hit
CATAGAACTCTTACCCTTTTGCCAGGTACGGTTGCAGGATGAATGGGGAC2170.3080898429735639No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2160.3066700741119346No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT2140.3038305363886759No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGGATCTCAGAGTTAGCTTGCCTC2130.3024107675270466No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC2070.2938921543572707No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT2000.28395377232586533No Hit
CATAGAGAAGCCAGGGAACAAAGTGGATCTCAGAGTTAGCTTGCCTCTAT1970.2796944657409774No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT1910.2711758525712014No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGGACAGGGGTGTGGTGTTCTGTC1850.26265723940142544No Hit
CATAGACACTTGACCATGCCCTTGTTCCTCATAGACACTTGAAAGCTCCC1810.25697816395490813No Hit
CATAGAACTGACCATACACTTGCCCTCTCATAGAACTTTCCCACCGCCCT1690.23994093761535623No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT1580.22432348013743364No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC1560.22148394241417496No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1560.22148394241417496No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCGTCAGTGGGTAGGTGGCTT1540.21864440469091634No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTAGACTTGGTCTAGGATGAGATAA1450.2058664849362524No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT1370.19450833404321777No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT1340.19024902745832978No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT1310.18598972087344182No Hit
CATAGACAATTTCAGTGCGGCCGATGACACTGACGAAATGTTTGCTATTA1270.1803106454269245No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTAGGCAATTCTATGTGTAGAACCA1270.1803106454269245No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1240.1760513388420365No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTAGCAGAGACTGGGTCCCA1210.17179203225714854No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1150.16327341908737258No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA1130.1604338813641139No Hit
CATAGAGAAGCCAGGGAACAAAGTGGTACGGTTGCAGGATGAATGGGGAC1120.1590141125024846No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT1110.15759434364085528No Hit
CATAGAAAAGGGAGGGATTACGGGTGTAGAACCATGTCGTCAGTGTAGAT1110.15759434364085528No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC1090.1547548059175966No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCTGAGAAGGTAGGTGGCTTCTG990.14055711730130335No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT930.13203850413152737No Hit
CATAGATCCATGGTGTGCAAGGACAATCCATGGTGTGCACAGGACATTGG930.13203850413152737No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTACGGTAGCGAGACTGGGTCCCAA900.1277791975466394No Hit
CATAGAAGAGAACCAAAAATGGACCCATGTAAGAAAGAAAACCCACAAAA890.12635942868501007No Hit
CATAGAGGGATGGTATCAGAGAAGGCTACACTGAACGAAATTTAGGTGAG880.12493965982338076No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA860.1221001221001221No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG840.11926058437686345No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT830.11784081551523412No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGCTCCTCTTCTCTTCCCTC820.1164210466536048No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC810.11500127779197546No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGTGTAGAACCATGTCGT780.11074197120708748No Hit
CATAGATCCATGGTGTGCAAGGACAATGCACAGGACATTGGGGAATTCTA760.10790243348382884No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTCCCAAAGTAGGCAATTCTATGT740.10506289576057018No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)