FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808438

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808438
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences163483
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1676410.25427720313427No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA72634.442663763204737No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG54493.3330682700953616No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA54463.331233216909404No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT51913.175253696102959No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA46202.825981906375586No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT35452.168421181407241No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG32491.9873626003927014No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA23321.4264480098848198No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA21661.324908400261801No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT19831.2129701559183523No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG19321.1817742517570635No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA18411.126110971782999No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA17251.0551555819259495No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA16711.0221246245787023No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG15920.9738015573484705No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA14160.8661451037722577No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT14140.8649217349816188No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC12750.7798976040322235No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT12570.7688872849164745No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA10970.6710177816653718No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT10890.6661243065028168No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACAGCTAAAAATCTTGGAGCTC10260.6275881895976952No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9480.5798768067627827No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT9350.5719249096236306No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA8990.5499042713921325No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA8060.49301762262742915No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT7750.474055406372528No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA7600.4648801404427372No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC7300.44652960858315544No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG7270.4446945553971972No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6900.42206223277037974No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACAGTGAAACAAGATC6390.3908663286090909No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT6200.3792443250980224No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG6100.3731274811448285No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGCACAACTGGCATCTGGTGATC6090.37251579674950913No Hit
CATAGATGTGGTCTCAGTGCCCTATGTACGGAGATAGAGAGGTTGGTTCT6020.36823400598227335No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGTCATTCTTCTCTGGGGGC5970.3651755840056764No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT5970.3651755840056764No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT5840.35722368686652434No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTGTTCACTCTGATGGTACTT5830.35661200247120495No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACTCTATGCCTGTTCACTCTGAT5670.3468250521460947No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC5640.34498999896013655No Hit
CATAGATGTGGTCTCAGTGCCCTATGCCTCTTGTAGAAGGGATGGTCTAT5560.34009652379758143No Hit
CATAGACTCTGTTTTGCTACCTGGGGGACATGTGTGAGAGGGAAGGACTC5540.3388731550069426No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG5270.3223576763333191No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT5130.3137940947988476No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTCGGTCATTCTTCTCTGGGGGC5070.31012398842693123No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT4940.30217209128777917No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC4890.2991136693111822No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC4580.2801514530562811No Hit
CATAGAAGTGACCCTCAGCTCAGTGACATGTGTGAGAGGGAAGGACTCTA4490.2746462934984066No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGATTTACTGACATGGGCAAT4400.2691411339405321No Hit
CATAGATCATGGGACTTCAGCATGGCACAACTGGCATCTGGTGATCTATG4340.2654710275686157No Hit
CATAGATGCTTCTGATATGTTGCCGTAAACTTAGCAACCTGTACATTTCG4330.2648593431732963No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG4200.2569074460341442No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA3950.24161533615115943No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGCAAACTAACACAGAAACAGAA3940.24100365175584007No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG3880.23733354538392373No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT3870.23672186098860432No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG3860.23611017659328493No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAATTTGCAAATACAGAAT3840.23488680780264617No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3770.23060501703541042No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGGTGGGGAAAGAGAGCACTCT3760.22999333264009103No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3720.22754659505881347No Hit
CATAGATGCCTCAAAGAGCTGAAGACACAGGCCTGTTCACTCTGATGGTA3660.22387648868689708No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG3610.22081806671030013No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA3570.21837132912902257No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA3430.20980774759455112No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCATAGAACAGCTAAAAAT3360.20552595682731536No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTATGGTGGAGGGCTTTGCTGTTTC3340.2043025880366766No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT3220.1969623752928439No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGGTCCAGTGAACTCAAGG3170.19390395331624696No Hit
CATAGATGCTTCTGATATGTTGCCGTATGGTGGAGGGCTTTGCTGTTTCT3120.19084553133965002No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3080.18839879375837243No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACACATAGAACAGCTAAAA3020.1847286873864561No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCAGATGCACAACTGGCATCTGGT3010.18411700299113667No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3010.18411700299113667No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG2990.18289363420049792No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGGCACAACTGGCATCTGGTGAT2940.17983521222390095No Hit
CATAGACAGCTGGGGTGGGAGGTTAGTGTAGAACATTAGCTTAGTTAATT2880.1761651058519846No Hit
CATAGATGCTTCTGATATGTTGCCGTACGGAGATAGAGAGGTTGGTTCTA2830.17310668387538766No Hit
CATAGACCTGTGTGTGAGGCATTGTTACCTGTCCTCTGCCTCTTGTAGAA2830.17310668387538766No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCATAGATGCTCAGATCTCA2780.17004826189879071No Hit
CATAGATGTGGTCTCAGTGCCCTATGTGACATGTGTGAGAGGGAAGGACT2780.17004826189879071No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA2760.16882489310815194No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCACATCTACAAGGACACTCATCT2700.16515478673623557No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTAGACCAAAGCTAGAAACT2670.1633197335502774No Hit
CATAGACCACCGTGCCCAGATAAGTTCCACCGTGCCTCTTGTAGAAGGGA2650.16209636475963862No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACATGTGTGAGAGGGAAGGAC2610.15964962717836106No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT2600.15903794278304165No Hit
CATAGATGCCTCAAAGAGCTGAAGACACGTTGCCTTTCCTCAGTTCTTTT2570.15720288959708348No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC2570.15720288959708348No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTACGGAGATAGAGAGGTTG2570.15720288959708348No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAACTTAGCAACCTGTACAT2530.15475615201580592No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTGGTCATTCTTCTCTGGGG2510.15353278322516714No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC2510.15353278322516714No Hit
CATAGATGCTTCTGATATGTTGCCGTACAGGTGCAAATTGTCAGTGTGTC2440.14925099245793141No Hit
CATAGATGATCCATCTACCTCTGCTTCAACACGGACTACAAGTACCCACC2420.14802762366729263No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2400.14680425487665383No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCGGTCATTCTTCTCTGGGGGCTC2370.1449692016906957No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACGCAAACTAACACAGA2350.14374583290005688No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC2240.1370173045515436No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACTGCACATCTACAAGGAC2220.13579393576090482No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGCACATCTACAAGGACACT2200.13457056697026604No Hit
CATAGATGTGGTCTCAGTGCCCTATGCATAGAACAGCTAAAAATCTTGGA2190.13395888257494662No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGAGACCAGAACATTAGCTTAGTTA2160.13212382938898845No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA2160.13212382938898845No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT2100.1284537230170721No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG2090.12784203862175272No Hit
CATAGAGGATCCCCTGACATTTTGGTTGTACACATAGAGAACAGCTAAAA2080.12723035422643333No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCAGCTGGTGGAGGGCTTTGC2080.12723035422643333No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG2050.12539530104047517No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG2040.12478361664515576No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG2040.12478361664515576No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTGGCTGAGAAAGGAGGAT2020.12356024785451698No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACAGTGAAACAAGATCGTGCC1990.12172519466855881No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGTGTGAGAGGG1990.12172519466855881No Hit
CATAGAATACAACACACTCTCTGCCCTGCATGGTTCTGCACATCTACAAG1960.11989014148260063No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACTCTATGAGACCAAGTCTCTGC1960.11989014148260063No Hit
CATAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCTAC1950.11927845708728124No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGGTGGAGGGCTTTGCTGTTTC1930.11805508829664246No Hit
CATAGACCCCATGTGCAGTGTAAGCTCTTGGTCTCCAGATCCTTGTCAAC1920.11744340390132309No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACGGACTACAAGTACCCACCAC1920.11744340390132309No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC1910.11683171950600368No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA1890.11560835071536489No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1890.11560835071536489No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1880.11499666632004552No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGACACTTTGGACTCTGCCTCTA1850.11316161313408733No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACACTTTGGACTCTGCCTCTATG1820.11132655994812916No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC1810.11071487555280976No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA1800.11010319115749038No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACATAGAGAACAGCTAAAAATC1790.109491506762171No Hit
CATAGACTCTGTTTTGCTACCTGGGGATGGCTGGGCCTGTTCACTCTGAT1790.109491506762171No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTTACGGTCTGCTGAGATTGGC1780.10887982236685159No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA1770.10826813797153222No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTGGTGGAGGGCTTT1770.10826813797153222No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGCTGAGAAAGGAGGATCACTCTA1760.10765645357621281No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1750.10704476918089344No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTTCAGTGTAGACCAAAGCTAG1720.10520971599493525No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTGGCTGAGAAAGGAGGATCACT1690.10337466280897709No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA1650.10092792522769951No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)