FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808444

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808444
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40437
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1215030.046739372357003No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC39459.755916611024556No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA19954.933600415461088No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT11982.962633231941044No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT11512.846403046714643No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT10712.6485644335633207No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA9262.28998194722655No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA8502.1020352647327942No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA6811.6841011944506268No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA6651.6445334718203624No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG6481.6024927665257067No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA5221.2908969508123747No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT4161.0287607883868735No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT4010.9916660484210006No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC2480.6132997007690976No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG2460.6083537354403146No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG2170.5366372381729604No Hit
CATAGACACCATGCCTGGCTAATTTTTAAAAAGTAGCTGGGCATGGTGGC2010.497069515542696No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTTACGGTTGCACAGATCATTTAA1930.4772856542275638No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT1750.43277196626851644No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA1670.4129881049533842No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1600.3956772263026436No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC1570.3882582783094691No Hit
CATAGATGAAAGCCTGTTGAATTTATGAACACTGACTGATACAGGAAGGC1530.37836634765190297No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG1460.3610554690011623No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG1420.3511635383435962No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGGTTCTACACATAGATGCCCTT1400.34621757301481315No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA1380.3412716076860301No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC1340.33137967702846405No Hit
CATAGAGCTGGCTTCCTAACTTCCAATGGGCAAGCAATGACAGTCTATGA1210.29923090239137423No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1190.2942849370625912No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1190.2942849370625912No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1190.2942849370625912No Hit
CATAGATGCCCTTTTTGTGTACTTCCACATAGATGCCCTTTTTGTGTGCT1120.2769740584118505No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT1100.2720280930830675No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTATCCCCAGAAATGTTAG1030.25471721443232687No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1020.2522442317679353No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT930.2299873877884116No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA890.22009545713084552No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT890.22009545713084552No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC880.21762247446645397No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGTTCTACACATAGAGCTGCCTTCC840.20773054380888792No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG820.20278457848010487No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT820.20278457848010487No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA790.1953656304869303No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA790.1953656304869303No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT770.19041966515814726No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATCCCCA770.19041966515814726No Hit
CATAGACCTTTGGGTTCATATCATCTGGATCCTTTCCCTCACTCTCTCCA760.18794668249375573No Hit
CATAGAGGATCCCATCTGAGTTGGTCTAGCAGAATTACCTCTGGATGGTC740.18300071716497268No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGTATCCCCAGAAATG730.18052773450058116No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG720.17805475183618963No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAGCTATC680.16816282117862352No Hit
CATAGACAGAAACCACCCAGACAACCTTCCTAACCATGGGCATATCTATG630.15579790785666592No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA620.1533249251922744No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT620.1533249251922744No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA620.1533249251922744No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC610.15085194252788287No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTAACAAGCAATGGGGAAA570.1409600118703168No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTTCTACACATAGAAAACAGAG570.1409600118703168No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA550.13601404654153376No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT540.13354106387714224No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA540.13354106387714224No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA520.12859509854835918No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAAATTTGGACCTGCG520.12859509854835918No Hit
CATAGAGAGATTTTGGGCTGAGACGAGGTTCTACACAAAGTCACGAAAGT520.12859509854835918No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTTAAATGATCTATCCAGGAATTT510.12612211588396766No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG480.11870316789079308No Hit
CATAGAGCTGGCTTCCTAACTTCCAATCTACAAGCAATGGGGAAAGGATT480.11870316789079308No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG460.11375720256201004No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG460.11375720256201004No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG460.11375720256201004No Hit
CATAGATGTATACAAGCTGTCACAGACAACACACTGACGACATGGTTCTA460.11375720256201004No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAACATACAATCA440.10881123723322698No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAG430.10633825456883549No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCA420.10386527190444396No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG410.10139228924005243No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)