FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808447

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808447
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences165190
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5487033.21629638597978No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG91825.558447847932683No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG71344.318663357346086No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT55883.382771354198196No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC51713.1303347660269996No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA38822.3500211877232275No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG36592.215025122586113No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG34872.1109025970095043No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT23981.45166172286458No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT22331.3517767419335311No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT21411.2960832980204613No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG17521.0605968884315031No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG14820.8971487378170593No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA14430.8735395605060838No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT11610.702827047642109No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT10990.6652945093528664No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGATGTTTTAAAATGAGCA10870.6580301471033356No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC10240.6198922452932987No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCATCAATTTAAGGTAGGCACTTCCT9530.5769114353169078No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA9000.5448271687148133No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG8990.5442218051940191No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT8940.5411949875900478No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA8450.5115321750711302No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGATTGGCCTCAGTTTCCCCTCC8420.5097160845087475No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC7540.4564440946788546No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA7440.4503904594709123No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACCTGATGTGGCATG7320.4431260972213814No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA7310.44252073370058725No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATAGCAAAGCTGCTA7030.4255705551183485No Hit
CATAGATGACCTGTTAATCTGCCCCCAGATCACAGAGTGGCCTTGGGCAA6940.4201222834312004No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTTTGAGGTAAAAC6730.4074096494945214No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGTAGCAAAGCTGCTA6160.37290392880924994No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA5640.34142502572794964No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT5270.3190265754585629No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCAGTCTGCATAGCCACATCT5240.31721048489618014No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA4900.2966281251891761No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG4780.2893637629396453No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG4350.2633331315454931No Hit
CATAGATGATGTGAAAAGGACCCATGGTAGCAGAGACTTGGCCTCAGTTT4320.26151704098311035No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC3970.24032931775531205No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA3770.2282220473394273No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA3750.22701132029783888No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG3730.22580059325625038No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG3620.21914159452751375No Hit
CATAGAGGGGAGACACTGGCTATAAGAACAGAGACTTGGTCTCATAGAGG3400.20582359707004058No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACACTGGGGGCACAAAGTT3400.20582359707004058No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT3140.1900841455293904No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA3010.18221441975906533No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGAGATTT2910.17616078455112294No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCTCTGGCCTCAGTTTCCCCTC2810.17010714934318058No Hit
CATAGACACACCCAACTCTGCTCAGTTTCCCCTCCTTCTATGTGTAGAAC2720.16465887765603246No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2640.15981596948967855No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2600.1573945154065016No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA2580.15618378836491312No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG2550.1543676978025304No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT2510.15194624371935347No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2400.14528724499061688No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG2390.14468188146982264No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2330.1410497003450572No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA2310.13983897330346873No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCTCA2140.1295477934499667No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA2140.1295477934499667No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2120.12833706640837825No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2120.12833706640837825No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA2110.12773170288758398No Hit
CATAGATTAGGGGTGACGGACTAGCCTGGGCAAGATGATGGAACCTCATC2090.12652097584599553No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA2060.1247048852836128No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCATGAATGTTGGAGAGGCACA1990.12046734063805314No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1960.11865125007567044No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAGCAAACACTCAAAACAGCCCT1840.11138688782613959No Hit
CATAGATACGATCATAAGGGTGGGGCCATGCTGAAGTCCCATGATCTATG1790.10836007022216841No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA1780.10775470670137416No Hit
CATAGATACGATCATAAGGGTGGGGCATGGAGAAGGGTCTATGTGTAGAA1740.10533325261819723No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)