FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808452

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808452
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35348
Sequences flagged as poor quality0
Sequence length150
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC29498.342763381237976No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA18705.290256874504923No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA15714.4443815774584134No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG15534.393459318773339No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT15404.35668213194523No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT15164.288785787031798No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT14594.127531967862397No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA13193.731469955867376No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT11843.3495530157293203No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA10813.05816453547584No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT8332.3565689713703746No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT7172.0284033042887857No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC5661.6012221342084416No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA5451.5418128324091886No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT4801.3579268982686432No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC3631.0269322168156614No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA3470.9816679868733733No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT3000.848704311417902No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2860.8090981102184No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA2850.806269095847007No Hit
CATAGACAGGGAGGCGTATAAGTGATGATCTATCCAGGAATTTTATTTTA2720.7694919090188979No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAACCCATCTCTACT2720.7694919090188979No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG2710.7666628946475048No Hit
CATAGACCTTTGGGTTCATATCATCTGGACACTGACGACATGGTTCTACC2670.7553468371619328No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG2650.7496888084191468No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG2490.7044245784768586No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA2380.6733054203915355No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC2370.6704764060201426No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTT2260.6393572479348195No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA2140.6054090754781034No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC1930.5459997736788503No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAC1920.5431707593074573No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCACCTGTA1890.5346837161932783No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG1480.41869412696616504No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT1350.3819169401380559No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1310.37060088265248387No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTATCCCCAGAAATGTTAG1250.35362679642412587No Hit
CATAGATCATGGGACTTCAGCATGGCTAACATGGTGAAAACCCATTTCTA1210.3423107389385538No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA1150.3253366527101958No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT1150.3253366527101958No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA1080.3055335521104447No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTGTAACAAGCAATGGGG1060.2998755233676587No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA1030.2913884802534797No Hit
CATAGAGGATCCCATCTGAGTTGGTCAGTGTACCTGATTGGCCATTTGAA1000.28290143713930066No Hit
CATAGATCATGGGACTTCAGCATGGCCGACATAGTGAAACCCCATCTCTA990.28007242276790767No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGCAAAACCCCGTCTCTA970.27441439402512163No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA930.2630983365395496No Hit
CATAGACACCATGCCTGGCTAATTTTTTAAAAATTGATTTTTGTAGAGAC920.2602693221681566No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGCAGAGATAGGGTT870.24612425031119156No Hit
CATAGAGAGATTTTGGGCTGAGACAATAATGCCGCATATCTACAACTATC850.24046622156840558No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACTCTGTTATTCAAA770.21783410659726152No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTATA760.2150050922258685No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACACATAGAGCTGGCCTTCCTAAC740.20934706348308252No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAA740.20934706348308252No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTCAGTACAAAATTTCTC730.20651804911168947No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG730.20651804911168947No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA730.20651804911168947No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT710.20086002036890346No Hit
CATAGAGCGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC690.19520199162611745No Hit
CATAGAGGATCCCATCTGAGTTGGTCTGTGCTTCTTTCAAAAGTCTGGTC670.18954396288333145No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGGTGAAACTCCATTTGTA670.18954396288333145No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC630.17822790539775943No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCAATGGGCAA610.17256987665497342No Hit
CATACTCAGGAGGCTGAGGCAGTCTATGAGACCAAGTCTCTGCTACCGTA580.1640828335407944No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT580.1640828335407944No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAATGAAACCCCATCTCTA560.15842480479800838No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTATCTTTA560.15842480479800838No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATCTTTAGTAGAGATAGGGTT550.15559579042661537No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTTTAGTAAAGACGGG540.15276677605522235No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTGTAATTTTTGTATTTTT530.14993776168382936No Hit
CATAGAACTTCACAAGGGCTTTAGAGGCTACACATGGCTATGCAATCTAT500.14145071856965033No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA500.14145071856965033No Hit
CATAGATCATGGGACTTCAGCATGGCCGATATGATGAAACCCCGTCTCTA490.13862170419825734No Hit
CATAGAGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATATACAATCA490.13862170419825734No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA470.1329636754554713No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA470.1329636754554713No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACGACATGGTTCTACAC440.1244766323412923No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACA440.1244766323412923No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA430.12164761796989929No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCTACACATGGCTATGCAATCTAT410.11598958922711328No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTATCTCTA400.11316057485572027No Hit
CATAGAGCGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA380.10750254611293425No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG370.10467353174154126No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA370.10467353174154126No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA370.10467353174154126No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT360.10184451737014824No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)