FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808455

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808455
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121857
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1474812.102710554174156No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA82806.794849700878899No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG72825.975856947077312No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG58114.768704300942908No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG56974.675152022452546No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC50264.124506593794366No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG38683.174212396497534No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA29332.4069195860721995No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG28472.3363450601935054No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG26422.1681150857152236No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT23441.9235661472053307No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG22671.8603773275232445No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT20481.6806584767391286No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA18441.513249136282692No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT15261.2522875173358938No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC14751.2104351822217845No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT13491.1070352954692795No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC12251.005276676760465No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT11960.981478290126952No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT10730.880540305439983No Hit
CATAGACCCCATGACTCAGCTCCTCATTCTAAAAAAGAACGATGAAATAC9930.8148895836923606No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT8920.7320055474859877No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT8890.7295436454204518No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA8420.6909738463937238No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG7740.635170732908245No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC7600.623681856602411No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT7380.6056279081218149No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG7150.5867533256193735No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACGAATGAGGAAACAGG6760.5547485987674077No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC6430.5276676760465135No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC6210.5096137275659174No Hit
CATAGACCAGTTACCACAAGAAGCAATGATAGACCATGGAGAGAATAATC6060.4973042172382382No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG5930.48663597495424965No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTACGACATGGTGCTGGAATAGTTG5920.4858153409324044No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGCCCGTTCTCTCTGT5880.48253280484502326No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT5750.4718645625610346No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG5670.4652994903862724No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT5630.4620169542988913No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG4920.40375193874787657No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGTGCTCGTATCTTG4880.40046940266049547No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG4680.38405672222358994No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG4020.3298948767818016No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG3580.2937869798206094No Hit
CATAGATGGTATTTGAGTGGGGAAACAGAGCCCGTTCTCTCTGTTGTGTC3500.2872219076458472No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC3340.27409176329632273No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG2810.23059816013852302No Hit
CATAGAGCAGCTTGAATTCTCCTCAGAAAATGGGATTTTCTTTTCTATTG2810.23059816013852302No Hit
CATAGATGGGACAGCGACAATGACAGACCCAGGCTACACATCTATGTGTA2770.22731562405114192No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG2720.22321245394191555No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG2690.22075055187637968No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTGGGAGAAGAAATGTTGG2500.20515850546131942No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTAGA2470.2026966033957836No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGCTCGTATCTTGGCCATCTA2360.19366962915548552No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTTCAGCATCATTTCTATG2340.19202836111179497No Hit
CATAGAACTTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG2290.18792519100256858No Hit
CATAGACCTCCCATGGTTCCTGATGACCTCCCATGATTTACCATCACAAA2050.16822997447828192No Hit
CATAGATCTAGCCCATCACTTCAGCATGCAGGCCCTTCAGCATCATTTCT2000.16412680436905552No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTCTACACATAGATGCCTGGCCAA2000.16412680436905552No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA1970.1616649023035197No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG1950.16002363425982913No Hit
CATAGAACACCTGAACTACATAGCGGACCCTGGGAGAAGAAATGTTGGTC1940.15920300023798387No Hit
CATAGAATCTGGTTCAAGCACACAGTGCCTGGGTCCTAAATGTCTTTGTC1900.15592046415060276No Hit
CATAGATGGGACAGCGACAATGTCAGACCCAGGCTACACATCTATGTGTA1860.15263792806322166No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG1800.14771412393215No Hit
CATAGAGCTAATAAAGACATACCTGAGCCACATGCCTGGCCAACTGTTTT1750.1436109538229236No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA1650.1354046136044708No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTACGAATGAGGAAACAGG1650.1354046136044708No Hit
CATAGATCTAGCCCATCACTTCAGCATAAACATATTTCCCCTTTGGGATT1600.13130144349524442No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGCAGGCCCT1490.12227446925494638No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC1460.11981256718941054No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG1440.11817129914571999No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAATCTATGGACTGTTAATATAG1300.10668242283988609No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAGCAAGGGGAAAGTCTGCCCTCA1290.10586178881804081No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGACAGTTGTGGAAAGTGC1280.10504115479619554No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATCTGGTTATAGAAAACAAGGAG1270.10422052077435026No Hit
CATAGATGGCAAATGGTGGGATCTCTGTAGCAGGCCCTTCAGCATCATTT1230.10093798468696914No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG1220.10011735066512387No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG1220.10011735066512387No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)