FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808462

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808462
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100676
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3501234.77690810123565No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC78037.7506059040883635No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA32363.2142715244944178No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT28132.7941118042035837No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT22692.2537645516309746No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG22512.235885414597322No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA21762.1613890102904367No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT14711.4611228098057134No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG13911.3816599785450356No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA12501.2416067384480909No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA10541.04692280185943No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA8980.8919702809011085No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG8050.7995947395605706No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC6380.6337160793039056No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT5280.5244546863204737No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT5210.5175016885851643No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT5190.5155151178036473No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG4370.4340657157614526No Hit
CATAGAGCAACAGGGACTCTCATTCACTGCTGGTGGGAATGCAAACTGGA4230.420159720290834No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA4000.39731415630338907No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC3860.38340816083277046No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT3760.3734753069251857No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT3760.3734753069251857No Hit
CNTAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC3670.3645357384083595No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG3520.3496364575469824No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG2940.29202590488299096No Hit
CATAGAGCCAAGGAAAGTTGAATGGATACGGTTGCACAGATCATTTAAGC2860.2840796217569232No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT2700.26818705550478766No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA2700.26818705550478766No Hit
CATAGATGTCCATCATGTGGAAGCTGTACGGTTGCACAGATCATTTAAGC2600.2582542015972029No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT2490.2473280622988597No Hit
CATAGAGCTGGCTTCCTAACTTCCAACACTGACGACATGCTTCCTTCTGC2400.23838849378203347No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT2380.23640192300051652No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT2310.2294489252652072No Hit
CATAGAGCTGGCTTCCTAACTTCCAACACTGACTGATACAGGAAGGCCTT2170.21554292979458858No Hit
CNTAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA1830.1817712265088005No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA1830.1817712265088005No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1700.16885851642894037No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1670.16587866025666495No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1600.15892566252135562No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1590.15793237713059716No Hit
CNTAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT1570.1559458063490802No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1550.15395923556756327No Hit
CATAGAGCAACAGGGACTCTCATTCAACACTGTACCATGTTTTCATCCTG1540.15296595017680478No Hit
CATAGATGTATACAAGCTGTCACAGACAACATTTTTCTTCATTCAGCAAC1510.1499860940045294No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1510.1499860940045294No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG1470.14601295244149548No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1470.14601295244149548No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA1350.13409352775239383No Hit
CNTAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT1340.13310024236163537No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG1340.13310024236163537No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1330.13210695697087688No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCACCTGATT1320.1311136715801184No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCCGATTTGGACCTGCG1320.1311136715801184No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1300.12912710079860146No Hit
CATAGACCTTTGGGTTCATATCATCTGGACACTGACTGATACAGGAAGGC1270.12614724462632604No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA1180.11720767610949978No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA1160.11522110532798284No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGACACATGGTTCTACACA1140.1132345345464659No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGCCCTGCG1110.11025467837419048No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1080.10727482220191506No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1060.1052882514203981No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG1050.10429496602963964No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT1050.10429496602963964No Hit
CATAGATGTATACAAGCTGTCACAGACAACAATGGGCAAGCAATGACAGT1040.10330168063888118No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1010.10032182446660576No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)