FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808469

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808469
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102498
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG79737.778688364651018No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT73147.1357489902242No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT63996.243048644851608No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG50784.9542430096197No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT35003.414700774649262No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT33653.2829908876270757No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT30853.009814825655135No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG26692.603953247868251No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT24162.3571191633007476No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT20902.039064176861988No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT16611.6205194247692636No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG15321.4946633105036196No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT15071.4702725906846963No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT15031.4663700755136686No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC11081.0809967023746805No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT10130.9883119670627719No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG9970.9727019063786609No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT9900.9658725048293626No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9470.9239204667408145No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG8260.8058693828172256No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG8210.800991238853441No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7920.7726980038634901No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA7080.6907451852719078No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC6930.6761107533805538No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT6560.6400124880485473No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6050.5902554196179437No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG5840.5697672149700482No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA5830.5687915861772913No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT5540.5404983511873402No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC5380.5248882905032293No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT5250.5122051161973893No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT5210.5083026010263615No Hit
CATAGAACTGACCATACACTTGCCCTTCTGTCTAGGATGAGATAATTGCC5090.49659505551327826No Hit
CATAGAGCAGAATTTTGGGGAGAGGGACACTTGAAAGCTCCCTGGATCTA4730.46147241897402874No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT4710.45952116138851495No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT4660.45464301742473023No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC4640.4526917598392164No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4470.4361060703623485No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTAGACAGAGTGGGAGTCATTCATG4340.42342289605650846No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT4300.41952038088548066No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3970.3873246307245019No Hit
CATAGAACTGACCATACACTTGCCCTATAGATGTGGTTGCATGGGGGTCT3830.3736658276259049No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC3800.3707389412476341No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGTGCACAGTTTGGAATGACTCTA3770.3678120548693633No Hit
CATAGAGGCCATTCTTCTCATGCTGGTAGGTGGCTTCTGGTGCATCTATG3770.3678120548693633No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGTCTGGCACAATGAGGCAAT3750.36586079728384946No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3720.36293391090557864No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT3670.358055766941794No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3620.3531776229780093No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG3580.34927510780698157No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT3400.3317137895373568No Hit
CATAGAACTAGTTCCAGCACCACCAGTAATCTATGGCATTCTTTCTCCAG3300.3219575016097875No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT3210.3131768424749751No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT3170.3092743273039474No Hit
CATAGAACCTCAAGCCGGAAAACCTTGGATCTCAGAGTTAGCTTGCCTCT3010.29366426661983647No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACCATCAGTTAGGCTACTT2960.28878612265605186No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG2960.28878612265605186No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGCACATGTACACGGCAGGAC2890.2819567211067533No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG2800.27317606197194094No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC2790.27220043317918396No Hit
CATAGAACTGACCATACACTTGCCCTTACGGTAGGTGGCTTCTGGTGCAT2770.2702491755936701No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG2770.2702491755936701No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2770.2702491755936701No Hit
CATAGATGAAAACATTCCGAAGCTAGATCATACGGTTGCAGGATGAATGG2770.2702491755936701No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2670.2604928876661008No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTGTCCTCTTCACCTCCCAG2660.25951725887334387No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTACGGTAGGTGGCTTCTGGTGCA2660.25951725887334387No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC2530.24683408456750378No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT2430.23707779663993445No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCAGGGCTGCATGGTGACTTTTC2310.22537025112685125No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2300.2243946223340943No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2300.2243946223340943No Hit
CATAGAACATCTCCCTGTTCCTCCCAGAGTGGGAGTCATTCATGATCTAT2290.2234189935413374No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG2090.20390641768619874No Hit
CATAGAACTCTTACCCTTTTGCCAGGACACTTGAAAGCTCCCTGGATCTA2010.1961013873441433No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTACGGTTGCAGGATGAATGGGGA1960.19122324338035865No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC1920.18732072820933093No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT1910.18634509941657398No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG1910.18634509941657398No Hit
CATAGAGGGATGGTATCAGAGAAGGCTAACTTCGCCTGCCTTTCTCTATG1890.1843938418310601No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1800.17561318269624773No Hit
CATAGACAGGGGCCAGAACTCCTAAGACTTGGTCTCATAGACAGGGGTGT1770.17268629631797694No Hit
CATAGAACTAGTTCCAGCACCACCAGCTCCTCTTCTCTTCCCTCTATGTG1760.17171066752522No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1760.17171066752522No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG1640.16000312201213682No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT1580.15414934925559523No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT1570.1531737204628383No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT1540.15024683408456752No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACTTTCTGAAATGTTTGCTATTA1520.14829557649905364No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGGCACAATGAGGCAATCTATG1420.13853928857148434No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1420.13853928857148434No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTCCCAAAGTAGGCAATTCTATGT1370.13366114460769968No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1310.12780737185115806No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1280.12488048547288728No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT1280.12488048547288728No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG1270.12390485668013033No Hit
CATAGAACTAGTTCCAGCACCACCAGCACCACCACCACCACCAGCACCAC1190.11609982633807489No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC1160.1131729399598041No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC1140.11122168237429023No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTGGGTCCCAAAGTAGGCAATTCT1120.10927042478877635No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1120.10927042478877635No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTGGTAGCAGCTCCTCTTCTC1110.10829479599601943No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTCCCAAAGTAGGCAATTCTATG1090.10634353841050556No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTTGCAGGATGAATGGGGACATCTA1090.10634353841050556No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGCTCCTCTTCTCTTCCCTC1080.10536790961774864No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1080.10536790961774864No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCACCTCAGACTTAGACAGGGGT1070.10439228082499172No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT1050.10244102323947785No Hit
CATAGAAGGGGTGATGCTCTGATGGATGATGCTGAAGGATAGTTGGGTGC1050.10244102323947785No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)