FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808474

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808474
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112585
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4819842.81032109073145No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA54924.8780921081849264No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC35373.141626326775325No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC20191.7933117200337523No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC19831.7613358795576677No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG15681.3927254962916908No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT14101.2523870853133188No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA13291.180441444242128No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTACCGTAACTTCAGTTGAC12361.0978371896789094No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG12031.0685260025758316No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA11661.0356619443087445No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA10230.908646800195408No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG9330.8287071990051961No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACTTCAGTTGACT9100.808278189812142No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA8380.7443265088599725No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGAACCTGGGACGCTGAGCTTAC7930.7043567082648665No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT7210.640405027312697No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT5570.494737309588311No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG5450.4840786960962828No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT5250.4663143402762357No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT4820.42812097526313453No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC4800.42634453968112984No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGAACCCGAGAGGTGGAGCTTGC4640.4121330550250922No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT4190.37216325442998627No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG4090.3632810765199627No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACACTTCAGTTGACTATA3900.34640493849091797No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC3790.3366345427898921No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC3790.3366345427898921No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGACACTGACGACATGGTGGGTGCC2890.25669494159968026No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT2800.24870098148065908No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG2770.24603632810765197No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGGTGGGTG2730.2424834569436426No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGAATTAGCGGAGAGTGA2520.22383088333259313No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2490.22116622995958607No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG2420.21494870542256964No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC2380.21139583425856018No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGGGACATGGATGAAG2380.21139583425856018No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT2330.20695474530354843No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC2290.20340187413953903No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2250.19984900297552957No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA2180.19363147843851314No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCACTGACGACATGGGCAACA2160.19185504285650842No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA2150.19096682506550608No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2120.188302171692499No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGGGACATGGATGA2000.17764355820047076No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCAAGTCTCTGCTAC1990.1767553404094684No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC1990.1767553404094684No Hit
CATAGACCCTTAGAGTTTCAGCCTCCTCAGGGACTAAGAGTCAGCTCACG1960.17409068703646136No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGGGAGAGGCTGTTTGAGATCTAT1840.1634320735444331No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG1830.16254385575343075No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACGGACCATGCTCACAC1780.15810276679841898No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1780.15810276679841898No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1770.15721454900741663No Hit
CATAGACCTTCCTGTTGGCCACACAGCTCCCCTGTCGCTTCTCTCATCTG1750.15543811342541192No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1750.15543811342541192No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1730.1536616778434072No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGATCTATGGAGAGGTCTTGGCAGG1710.1518852422614025No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA1690.1501088066793978No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1660.1474441533063907No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1610.14300306435137897No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC1520.13500910423235776No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC1480.13145623306834836No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT1450.1287915796953413No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCGCTACCGTACCCCCAGTATTT1430.1270151441133366No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGGACATGGATGAAG1400.12435049074032954No Hit
CATAGATCTGTGGCTCCCGATAAATGTACACTGACGACATGGGCAACAGA1400.12435049074032954No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATAGAACCCAAAGAGTGAGCCCT1380.12257405515832481No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG1260.11191544166629656No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA1260.11191544166629656No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1260.11191544166629656No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC1240.11013900608429186No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGTTCTACACATAGAACCCAAAGAG1220.10836257050228716No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGTAGATTTGGACCTGCG1190.10569791712928009No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1130.10036861038326599No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)