FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808475

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808475
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112585
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4570340.59421770218057No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT52944.7022249855664615No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG45064.002309366256606No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA21191.8821334991339878No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG21031.86792201447795No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG19861.7640005329306745No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG15021.3341031220855355No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA13251.1768885730781187No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT12201.0836257050228715No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTACGGTAGCAGGAAAGTTG11861.0534263001287916No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG11761.0445441222187681No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT11501.0214504596527068No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA9530.846471554825243No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG8800.7816316560820713No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCTCATAGAGAAGCTTTGAG8590.7629790824710219No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT7820.6945863125638407No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCACGGTCTCGGC6980.619976018119643No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG6380.5666829506595017No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT5360.47608473597726164No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT4810.4272327574721322No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT4670.4147977083980992No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA4540.40325087711506863No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA4170.3703868188479815No Hit
CATAGACTCACTCTGTCACCCAAGCTGGATTGCAGTGGCGCGATCTCTGC4150.3686103832659768No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTCTCATAGAGGTTTCCTG3800.3375227605808944No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA3550.3153173158058356No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC3330.29577652440378377No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG2770.24603632810765197No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCTGTGACACCGAAA2690.23893058577963316No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA2660.23626593240662608No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2650.23537771461562373No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGCCATACCAAGAAT2590.23004840786960962No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG2570.22827197228760493No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT2550.22649553670560021No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2530.22471910112359553No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTGAAACATTTTCTGGTCA2430.21583692321357198No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGAAGCTTTGAGATTTGTG2390.21228405204956258No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGCAGGAAAGTTGGA2140.1900786072745037No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC2120.188302171692499No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2110.18741395390149665No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2060.18297286494648488No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA2060.18297286494648488No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2020.17941999378247547No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2020.17941999378247547No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCCCGGTTGGGACGGAGAAGCTCG2010.1785317759914731No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG2010.1785317759914731No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTACTATGGCTTAATGTTTCT1960.17409068703646136No Hit
CATAGATCAAGGTGTGAGCATGGTCCGTGTGTGCCATACCAAGAATAAGA1860.1652085091264378No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA1820.1616556379624284No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAGACATACAGAAGATGCGTGAGCT1770.15721454900741663No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1750.15543811342541192No Hit
CATAGATCTCAAACAGCCTCTCCCAGGTAAACAAACTTCTGGCCCTCTAT1750.15543811342541192No Hit
CATAGACAAGCCTGCCAAGACCTCTCCATAGATCTGTGACACCGAAAAAC1670.14833237109739306No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG1640.14566771772438603No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1640.14566771772438603No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC1570.13945019318736954No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1550.13767375760536485No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT1460.12967979748634365No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGCTGCTGCTCACT1440.12790336190433893No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1400.12435049074032954No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT1390.12346227294932717No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGTACGGTAGCGGAGACC1370.12168583736732247No Hit
CATAGATCCAGCTTCATCCATGTCCCCAGTGTAACCTGTGTATATTCTCC1370.12168583736732247No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTACATTTATCGGG1310.11635653062130834No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC1300.115468312830306No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1280.11369187724830129No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC1270.11280365945729894No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCTGC1260.11191544166629656No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG1260.11191544166629656No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA1220.10836257050228716No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA1220.10836257050228716No Hit
CATAGATCCAGCTTCATCCATGTCCCTACAAAGGACATGAACTCATCATT1190.10569791712928009No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT1150.10214504596527069No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1150.10214504596527069No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)