FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808479

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808479
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112683
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG91448.114799925454594No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT81747.253977973607377No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT79147.0232421926998745No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG55084.888048773994303No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT39653.518720658839399No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT39303.4876600729480045No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT31012.7519679099775476No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT27052.400539566749199No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT25482.2612106528935154No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG23362.0730722469227834No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT22952.0366869891642927No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG15791.4012761463574808No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT14891.3214060683510378No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC14631.2983324902602877No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT14491.28590825590373No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT14091.250410443456422No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT12581.1164062014678346No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT11721.0400859047061224No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT11641.032986342216661No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT10950.9717526157450547No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG10510.932705022053016No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT10080.8945448736721601No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG10050.8918825377386119No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG9880.8767959674485061No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT9860.8750210768261405No Hit
CATAGAATAGCTGTGTTGAAGAACCTCATGCCAAGTAAGTCTACAAAGAA8290.7356921629704569No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA8040.7135060301908895No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC7680.6815579989883124No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7520.6673588740093892No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT7330.6504974130969179No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6810.6043502569154177No Hit
CATAGAAAAGGGAGGGATTACGGGTGTCTCTCCCTCTCTCACACATCTAT6350.5635277726010135No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC5870.5209303976642439No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG5370.476558132105109No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT4990.4428352102801665No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4870.4321858665459741No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC4810.4268611946788779No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4780.4241988587453298No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT4680.4153244056335028No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTTGCAGGATGAATGGGGAC4660.4135495150111374No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC4600.4082248431440412No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC4450.3949131634763008No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA4370.3878136009868392No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGAGTGGGAGTCATTCATGATCT4270.3789391478750122No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGCAGGGCTGCATGGTGACTTT4070.36119024165135827No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT4050.35941535102899286No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC3830.3398915541829735No Hit
CATAGAAAAGGGAGGGATTACGGGTGGATCTCAGAGTTAGCTTGCCTCTA3780.33545432762706No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT3740.3319045463823292No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG3570.31681797609222334No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT3500.31060585891394443No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA3430.3043937417356655No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTAGGTGGCTTCTGGTGCAT3400.30173140580211744No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT3320.2946318433126559No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG3320.2946318433126559No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3310.2937443980014732No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3280.2910820620679251No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC3240.28753228082319426No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC3190.28309505426728077No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC2870.2546968043094344No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC2860.25380935899825174No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC2700.23961023401932857No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT2700.23961023401932857No Hit
CATAGAGAAGGAAAACTGGGCTGTGGCAGGGCTGCATGGTGACTTTTCTA2680.23783534339696316No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT2540.22541110904040537No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2480.2200864371733092No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2370.2103245387502995No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTGTCTCATAAAGCAGCAAAC2370.2103245387502995No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG2180.19346307783782826No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT2170.19257563252664556No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT2140.18991329659309744No Hit
CATAGAACTAGTTCCAGCACCACCAGTCCCAGTTAGGCTACTTGGGGGTC2130.18902585128191476No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1930.1712769450582608No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT1840.1632899372576165No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA1740.1544154841457895No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1720.15264059352342413No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAAGCAGCAAACAATTTCAG1720.15264059352342413No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGCCAAGTAAGTCTACAAAGAAC1670.14820336696751063No Hit
CATAGAACTGACCATACACTTGCCCTCATAGAACTTTCCCACCGCCCTTT1640.14554103103396254No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1590.14110380447804904No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTGGGTCCCAAAGTAGGCAATTCT1580.14021635916686634No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1530.13577913261095287No Hit
CATAGATCCATGGTGTGCAAGGACAAATCCATGGTGTGCACAGGACATTG1520.13489168729977016No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1500.13311679667740475No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1430.12690467949912587No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG1390.12335489825439508No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT1380.12246745294321239No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTCCCAAAGTAGGCAATTCTATG1330.11803022638729888No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC1330.11803022638729888No Hit
CATAGACAGGGGCCAGAACTCCTAAGACTTGGTCTCATAGACAGGGGTGT1230.1091557732754719No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTTTCCCACCGCCCTTTTCT1180.10471854671955841No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGCGTGTATGTGAGTGCCAAATC1150.1020562107860103No Hit
CATAGACTTGTTGCCGAGACTGGAGTGTAGTGGCGATCTCAGCTCATTGC1150.1020562107860103No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTACGGTAGCAGAGTGGGAGTCAT1150.1020562107860103No Hit
CATAGACACTTGACCATGCCCTTGTTCTATGTGTAGAACAACTTTCCCAC1140.1011687654748276No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGTGTAGAACTGCCAAGT1140.1011687654748276No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)