FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808484

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808484
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences162150
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC88905.482577860006168No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA67764.178846746839347No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA67754.178230033919211No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC62793.872340425531915No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA50133.091581868640148No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT44972.7733580018501387No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA40562.501387604070305No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA38032.345359235275979No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA34922.1535615171137836No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG31541.9451125501079247No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT22861.4098057354301574No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA20791.2821461609620721No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG19391.1958063521430773No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC18191.1218008017267962No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA18131.118100524205982No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC17701.091581868640148No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT17251.0638297872340425No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT16691.0292938637064446No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT16100.9929078014184398No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT15440.9522047486894849No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA13850.8541473943879125No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT13560.8362627197039778No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG13130.8097440641381437No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC12460.7684242984890534No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA11620.7166204131976565No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG10650.6567992599444958No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG10260.6327474560592045No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG9920.6117792167745914No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCTACCGTATGATCTAGCTTCGGA9730.6000616712920136No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT9680.5969781066913352No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC9370.5778600061671292No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG9260.5710761640456368No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG9090.5605920444033302No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT8750.5396238051187172No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG8610.5309898242368178No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA8230.507554733271662No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT7830.482886216466235No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA7340.45266728337958684No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA7110.4384828862164662No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT6900.425531914893617No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGATGACTTATGGAATCTGA6870.42368177613321No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC6660.41073080481036073No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAATTAGAGCCAGTTCTGA6600.40703052728954675No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACCCCTTTACCTACCTTCTCA6350.3916127042861548No Hit
CATAGACAGAACACCACACCCCTGTCAGTGTAAGGTTTTCCGGCTTGAGG6220.383595436324391No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCAAGTATATGACACATTACACCA6110.37681159420289856No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA5950.3669441874807277No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG5890.3632439099599137No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG5700.3515263644773358No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG5640.34782608695652173No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCATCGGCCGCACTGAAATTGTC5560.34289238359543633No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA5550.3422756706753006No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGGGCAAGTGTATG5380.3317915510329941No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5370.33117483811285847No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT5200.32069071847055197No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT5190.3200740055504163No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT5180.3194572926302806No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC5150.3176071538698736No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT5110.31514030218933087No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTACAAACCAAACAATAGCC5090.3139068763490595No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA5060.3120567375886525No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA5010.3089731729879741No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG4840.2984890533456676No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT4770.29417206290471787No Hit
CATAGAGCATCCTCGTAATAGCAAACATTCCAACTCTATAGATTATGCTC4750.2929386370644465No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGGTTTTCCGGCTTGAGGTTCT4690.2892383595436325No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTCAGCCTTCTCTGATACCAT4600.28368794326241137No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT4460.2750539623805119No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4440.2738205365402405No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC4420.27258711069996916No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAAAATGTCAGTGGGCCAT4100.2528522972556275No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGTGTACAAGCACATTATTAT4080.2516188714153561No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA4030.24853530681467778No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA3830.23620104841196424No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG3800.23435090965155722No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA3780.23311748381128583No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG3770.23250077089115015No Hit
CATAGATGCACCAGAAGCCACCTACCGTAACAAGCACATTATTATTGGTT3750.23126734505087881No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCATAGATCTGGTGGTGCTGGA3740.23065063213074313No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGATACTGAACAAGGGCATGGTC3680.22695035460992907No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC3670.22633364168979342No Hit
CATAGATTGCCTCATTGTGCCAGACAATGGGCACACTTAACACCTCTATG3530.21769966080789394No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC3530.21769966080789394No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG3530.21769966080789394No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC3500.21584952204748692No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAACAAGGGCATGGTCAAGTGT3500.21584952204748692No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGTACAGCCTACATCCCT3480.21461609620721553No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT3460.2133826703669442No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA3400.2096823928461301No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA3320.2047486894850447No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3290.2028985507246377No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGGCAAGTGTATGGTCAGT3200.19734813444341662No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG3110.1917977181621955No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATGATCTAGCTTCGGAATGT3010.18563058896083873No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT2980.1837804502004317No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT2980.1837804502004317No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACTTTGTTCCCTGGCTTCTCT2970.18316373728029603No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2910.17946345975948197No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2820.17391304347826086No Hit
CATAGATCATGAATGACTCCCACTCTGGAATCACTTGATCATCCATTGTC2820.17391304347826086No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTTTGCCAAGATTGTAGGAGTA2730.16836262719703976No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT2660.16404563675609002No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCTTAGGAGTTCTGGCC2560.1578785075547333No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT2540.15664508171446193No Hit
CATAGATCTGGGAGGTGAAGAGGACAAGCACATTATTATTGGTTGGTTCT2520.15541165587419056No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT2490.15356151711378355No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG2460.1517113783533765No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTGAACAAGGGCATGGTCAAGTGTC2390.14739438791242676No Hit
CATAGATGTCCCCATTCATCCTGCAACGTACTGGTGGTGCTGGAACTAGT2390.14739438791242676No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2380.1467776749922911No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGGGAGGAACAGGGAGATGTT2350.14492753623188406No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG2320.14307739747147702No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2260.13937711995066296No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCTTAGG2190.13506012950971324No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG2190.13506012950971324No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2190.13506012950971324No Hit
CATAGAGCATCCTCGTAATAGCAAACATTGGGAGGAACAGGGAGATGTTC2160.1332099907493062No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC2150.13259327782917052No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAACAAGGGCATGGTCAAGTGTCT2140.13197656490903484No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA2060.12704286154794941No Hit
CATAGAGCAGTGCAGCAGAAGATAGCGCCATTGTACTCCAGTCTCGGCAA2030.1251927227875424No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG2030.1251927227875424No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCACGCTGACATCCCAACCACACG1960.12087573234659266No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATGGGAGGAACAGGGAGATG1940.11964230650632131No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGGGCATGGTCAAGTGTCTATGA1880.11594202898550725No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGGGAGTGGTGAAAAGTAGGGGAC1850.1140918902251002No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCGTGTACAGCCTACATCCCTCATC1850.1140918902251002No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACCTGGCAAAAGGGTAAG1830.11285846438482887No Hit
CATAGACCCACTTACACACACAGGTTTACGCTGACATCCCAACCACACGT1820.1122417514646932No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGTGAAAAGTAGGGGACAGT1810.1116250385445575No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1800.11100832562442184No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCATCAGAGCATCACCCCTTCTAT1790.11039161270428616No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTACAATGGGCACACTTAA1780.10977489978415048No Hit
CATAGACCCCCATGCAACCACATCTAGACCTGGCAAAAGGGTAAGAGTTC1770.1091581868640148No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT1760.10854147394387913No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT1690.10422448350292939No Hit
CATAGAAAAGTCACCATGCAGCCCTGTCTTACCCTTTTGCCAAGATTGTA1670.10299105766265802No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGGCAAGTGTATGGTCAGTT1650.10175763182238669No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTGGTGAAAAGTAGGGGAC1630.10052420598211531No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)