FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808490

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808490
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109304
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3202929.302678767474198No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC58775.376747420039523No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT29112.6632145209690403No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA25972.3759423259898997No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT23572.1563712215472446No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG21121.9322257190953671No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA18921.7309522066895997No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT17901.637634487301471No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA15501.4180633828588158No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA14931.3659152455536852No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA13041.193003000805094No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG9870.9029861670204201No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC8860.810583327234136No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG8480.7758179023640489No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC6120.5599063163287711No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT5700.5214813730513065No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC5460.49952426260704097No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT5350.4894605869867525No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA5300.4848861889775306No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT5200.47573739295908657No Hit
CATAGAGGATCCCATCTGAGTTGGTCACACTGCTTCCTTCTGCTGGCTAT4900.4482910049037546No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT4710.43090829246871115No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACTGATACAGGAAGGC4520.4135255800336675No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA4400.4025470248115348No Hit
CATAGATGAAAGCCTGTTGAATTTATGACTGATACAGGAAGGCCTTTCTA4250.38882383078386884No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT4190.38333455317280246No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG4170.3815047939691137No Hit
CATAGAGGATCCCATCTGAGTTGGTCAGTGTAATAAATGGGGGCAAGGAA4120.3769303959598917No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC4080.3732708775525141No Hit
CATAGATGCCCTTTTTGTGTACTTCCATACACTGACTGATACAGGAAGGC3910.35771792432115934No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACTGATACAGGAAGGCCT3850.35222864671009296No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA3790.34673936909902653No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT3480.31837810144185025No Hit
CATAGACCTTTGGGTTCATATCATCTGGACACTGACTGATACAGGAAGGC3350.3064846666178731No Hit
CATAGACCAATAAAAGTTGATGGGATGAACCCCTTCCTAACCATGGGCAT3160.2891019541828295No Hit
CNTAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC2870.262570445729342No Hit
CATAGAACTTCACAAGGGCTTTAGGGACACTGACTGATACAGGAAGGCCT2750.25159189050720926No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG2720.24884725170167604No Hit
CATAGACAGAAACCACCCAGACAACCACACTGACTGATACAGGAAGGCCT2590.2369538168776989No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTCGACCTGATTGGCCATTTGA2490.22780502085925491No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCTATAGCAGAATTACCTCT2390.21865622484081096No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2260.20676279001683376No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT2230.2040181512113006No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA2160.1976139939983898No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG2100.19212471638732342No Hit
CATAGAGGATCCCATCTGAGTTGGTCAGTGTACCATTTTCCCCCAAGTCA2080.19029495718363465No Hit
CATAGATTGGAACTTTGCCAGCCTTATCCCCAGAAATGTTAGCATGTCTA2070.18938007758179023No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTTTGCACAGATCATTTAAGCTC2050.18755031837810143No Hit
CATAGAGCTGGCTTCCTAACTTCCAACACTGACGACATGGTTCTACCATT2000.18297592036887947No Hit
CATAGATGCCCTTTTTGTGTACTTCCAGGTCTCATACGTGAATGTGGATC1980.18114616116519067No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG1960.17931640196150186No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCTGTACCATGTTTTCATCCTGCT1890.17291224474859107No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTGATCTATCCAGGAATTTTAT1890.17291224474859107No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC1860.1701676059430579No Hit
CATAGAAACCCCAAAGGCTATGTTCAATGGGCAAGCAATGACAGTCTATG1780.16284856912830273No Hit
CATAGACAGAAACCACCCAGACAACCTGATTGGCCATTTGAACTCTATGA1780.16284856912830273No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1760.1610188099246139No Hit
CATAGACCAATAAAAGTTGATGGGATGAAGTCTCTGCTACCGTACACAAA1750.1601039303227695No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA1720.15735929151723635No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT1710.15644441191539193No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1700.15552953231354755No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1630.14912537510063675No Hit
CNTAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT1620.14821049549879234No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT1580.14455097709141476No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1560.142721217887726No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA1470.1344873014711264No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGTATCCCCAGAAATG1460.133572421869282No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCT1440.1317426626655932No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACGACATGGTTTGC1400.1280831442582156No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCCGATTTGGACCTGCG1400.1280831442582156No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG1400.1280831442582156No Hit
CNTAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA1400.1280831442582156No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1400.1280831442582156No Hit
CNTAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT1390.1271682646563712No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG1330.12167898704530485No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACTGATACAGGAAGGCC1330.12167898704530485No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC1310.11984922784161603No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1300.11893434823977164No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1290.11801946863792726No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1280.11710458903608285No Hit
CATAGACCAATAAAAGTTGATGGGATGAAACACTGACTGATACAGGAAGG1220.11161531142501646No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1220.11161531142501646No Hit
CATAGATGTCCATCATGTGGAAGCTGTACGGTAGCAGAATTACCTCTGGA1210.11070043182317207No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG1170.10704091341579447No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG1130.10338139500841688No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1130.10338139500841688No Hit
CATAGATGTCCATCATGTGGAAGCTGTGGTGTTGGTGAGTGTGGGCAGAT1100.1006367562028837No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)