FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199161
Sequences flagged as poor quality0
Sequence length150
%GC46

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6622133.24998368154407No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT106425.343415628561817No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG84654.250330134915973No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG41832.1003108038220333No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA37721.893945099693213No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG37241.8698439955613801No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT29911.5018000512148462No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG26801.3456449806940114No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG21451.077018090891289No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT21391.0740054528748098No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT20611.034841158660581No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA19240.9660525906176409No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG19130.9605294209207625No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT18060.9068040429602181No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT16640.8355049432368786No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA13300.6678014269862071No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT12780.6416918975100547No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG12560.6306455581162979No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCATGATCTACGTGTAGA12430.6241181757472598No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCATGACCTTAGC11880.5965023272628678No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGCTACGGTAGCAGAAG11800.5924854765742289No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA11520.578426499163993No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTGAGAAGCTTTGAGATTTGT11410.5729033294671145No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC10290.5166674198261708No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA9250.4644483608738659No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGTGTGATCATATC8060.40469770688036316No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT7620.3826050280928495No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC6950.3489639035754992No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG6860.3444449465507805No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA5650.2836900798851181No Hit
CATAGATAGCAGCAATCTCAGGCCTCCCAGAGACAGGTGGTGGCTTCTCA5540.2781669101882397No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCATGATCTATGTGTAGA5460.2741500594996008No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGAGGCTGAAACTCTAA5380.270133208810962No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC5260.2641079327780037No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG4790.24050893498225057No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTGCCATACCAAG4760.23900261597401096No Hit
CATAGAACAATCAGGCACCCACCATGTCAACCTGTGTATATTCTCCTGCA4740.23799840330185126No Hit
CATAGATTTCTGTACCTCACTGCCGAGGTTTCCTGGGCATCAAGTCTATG4670.23448365894929227No Hit
CATAGACACAACGTTTGAGACTGCCTCTGCTACAGAAGCTTTGAGATTTG4640.2329773399410527No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC4620.23197312726889302No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA4570.22946259558849375No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA4510.2264499575720146No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC4390.2204246815390563No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGCCATACCAAGAAT4290.2154036181782578No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT4200.2108846611535391No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAAACCAAAAGCA4160.20887623580921966No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT4010.20134464076802186No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA4000.200842534431942No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC3890.1953193647350636No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC3880.19481725839898373No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG3690.1852772380134665No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT3560.17874985564442838No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG3380.16971194159499098No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG3290.16519298457027232No Hit
CATAGAACAATCAGGCACCCACCATGTCGTAGGGAGACCCCATATCTACC3200.1606740275455536No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA3140.15766138952907446No Hit
CATAGAACAATCAGGCACCCACCATGTCACATTTATCGGGAGCCACAGAT3130.1571592831929946No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA3120.15665717685691477No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA3030.15213821983219605No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGCCATACCAAGAATAAGAA3010.15113400716003636No Hit
CATAGATAGCAGCAATCTCAGGCCTCTAGGTAAACAAACTTCTGGCCCTC3000.1506319008239565No Hit
CATAGATGTTGTTGTTCTGTTGCCCATACGGTAGCAGAAGCTTTGAGATT3000.1506319008239565No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT2980.1496276881517968No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTACTATGGCTTAA2970.14912558181571695No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA2920.14661505013531764No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA2910.1461129437992378No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGTGCCATACCAAGAATA2790.14008766776627954No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG2750.13807924242196012No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG2740.13757713608588026No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTACGTGGTGTTTGGGTGTGG2740.13757713608588026No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC2670.1340623917333213No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2570.12904132837252275No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACATGAACTCATCCTT2520.12653079669212344No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG2480.12452237134780404No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG2440.12251394600348463No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2380.11950130798700548No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT2330.11699077630660622No Hit
CATAGACGGGAAGAGTAAGACCACCCAGGAAAGTTGGAACCTATCAGTGT2290.11498235096228679No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA2270.1139781382901271No Hit
CATAGAGGAAAGAACAACTGCGGACGAGACTTGGTCTCATAGAGGCAAGG2220.1114676066097278No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG2130.10694864958500912No Hit
CATAGATCTCAAACAGCCTCTCCCAGTACACATTTATCGGGAGCCACAGA2050.10293179889637027No Hit
CATAGACTCACTCTGTCACCCAAGCTGGGCGTGGTGGCTCATGCCTGGAA2040.10242969256029043No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC2020.1014254798881307No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)