FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences308532
Sequences flagged as poor quality0
Sequence length150
%GC35

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA3245910.520464651964788No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG156995.0882890591575585No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC150874.8899303799929985No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG135544.393061335615106No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG108463.5153565918608116No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA105833.4301142182982645No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA102953.336768957514942No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA90702.939727483696991No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT88192.858374496000415No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG76342.474297641735703No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC67442.1858348566761308No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA64912.103833638001893No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT59491.9281630430555017No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT38951.2624298289966682No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA37761.2238600858257813No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC37571.2177018915379927No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG37231.2066819649177396No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC36761.1914485369426833No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA32061.0391142571921226No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG30991.0044338998872078No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA29130.9441484189646455No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG26990.8747877043548158No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG25410.8235774571195209No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC24500.7940829476359016No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG24130.7820906745491553No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA22640.7337974667133393No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA22200.7195363852047763No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA22070.7153228838499734No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA21100.6838836814333683No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT18060.5853525728287503No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG17410.5642850660547366No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG17340.5620162576329197No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT14850.48131150091400565No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGCCCTCTCTGCTGTTCCTTC14840.48098738542517466No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT14340.4647816109836257No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG12520.4057925920163873No Hit
CATAGAAAAAACAGTTGGCCAGGCATACACTGACGATCATTGTTCACTGC12370.4009308596839226No Hit
CATAGAGAAGACTCCCTCAACCCACCACGCTGTCCTTCTCTGAATCTATG12180.3947726653961339No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGGCTCAGGTATGTCTTTAT11850.3840768542647116No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA11680.37856689095458496No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGCTAATCTGAAATCTTCGTGT11150.36138877004654296No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCAAGGGGTAAGGCGTACT11110.36009230809121906No Hit
CATAGATGGCCAAGATACGAGCACATACACTGGCTCAGGTATGTCTTTAT11060.35847173064706417No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACACTGACGCTATACCACACTA10920.3539341138034305No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT10900.3532858828257685No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT10320.3344871844735716No Hit
CATAGATCCACGTGAGAATAAAGCATACATTGCTTCTTGTGGTAACTGGT10140.328653105674614No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGTGGAAGGGTAAGAGAG10140.328653105674614No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA10050.3257360662751352No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGGCTCAGGTATGTCTT10050.3257360662751352No Hit
CATAGACCTCCGACAGTTTTTATGCACACTGCCCTCTCTGCTGTTCCTTC9670.3134196776995579No Hit
CATAGATCCACGTGAGAATAAAGCATACAACACTGACGCTATACCACACT9600.31115086927774105No Hit
CATAGAGCTTGGGCGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA8990.29137982445905125No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG8730.2829528217494458No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA8690.28165635979412185No Hit
CATAGACCTCCGACAGTTTTTATGCACTGGAGACAGCCGCTCACCTCTAT8170.2648023543749109No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT7980.2586441600871222No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT7860.25475477422115045No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGGCTAATCTGAAATCTT7430.24081780820141832No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT7390.2395213462460944No Hit
CATAGAAAAAACAGTTGGCCAGGCATTGTCTGCCTCTAAGTAAACTGAAT7320.23725253782427755No Hit
CATAGAAAAAACAGTTGGCCAGGCATGATGTTCTTCCTTTTCTGCCTTCA7180.23271492098064384No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC6900.22363968729337638No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT6530.2116474142066301No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG6490.21035095225130618No Hit
CATAGAGTCCAACTATTCCAGCACCACATAGAGATCCCACCATTTGCCAT6390.2071097973629964No Hit
CATAGAAGGACAAAGACATTTAGGACCCTACGGTAGCAGCATAATTTCCC6250.20257218051936265No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG5890.19090402292144737No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTGGACATGCCAGGAATCAATG5880.19057990743261638No Hit
CATAGATCACGTAGAAACTGGAGAGGCACACTGCCCTCTCTGCTGTTCCT5880.19057990743261638No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGGCTCAGGTATGTCTTT5600.18150467374534893No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT5540.17955998081236307No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACTGGAGACAGCCGCTCA5270.17080886261392658No Hit
CATAGATCACGTAGAAACTGGAGAGGCTACGGTAGCAGCATAATTTCCCA5260.17048474712509562No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC5240.16983651614743367No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGAGATCCCACCATTTGC5100.16529889930379993No Hit
CATAGAAATGATGCTGAAGGGCCTGTCATTGTCGCTGTCCCATCTATGAG5060.16400243734847603No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA4850.15719601208302542No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTCCCAACTGTCTCTGAAAAA4790.15525131915003954No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC4650.15071370230640582No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGCAGCATAATTTCCCAT4540.14714843192926505No Hit
CATAGAGCTTTTTTTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG4470.14487962350744818No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTGCAGAAGTAGGAAGTAT4370.14163846861913837No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG4320.14001789117498348No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA4250.1377490827531666No Hit
CATAGACGGATTACTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC4250.1377490827531666No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC4190.13580438982018073No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGACATGCCAGGAATCAATGT4060.13159088846537798No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT4020.13029442651005405No Hit
CATAGACGGATTATTCTCTCCATGGTCTGCAGAAGTAGGAAGTATTACCC3990.1293220800435611No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT3980.12899796455473014No Hit
CATAGAGAAGACTTCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG3580.11603334500149094No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGATCATTGTTCAC3490.11311630560201212No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA3470.11246807462435016No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGACATTGCTTCTTG3420.11084749718019524No Hit
CATAGAAATGATGTTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG3280.10630988033656152No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT3170.10274460995942075No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGATCTACAAAGGATTCTGGG3100.1004758015376039No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)