FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808495

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808495
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences308532
Sequences flagged as poor quality0
Sequence length150
%GC33

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT3348010.851386566061219No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG161105.221500525067092No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG156475.071435053738348No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG136264.416397650810937No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG112113.63365874528412No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC104983.4025644017476306No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA103053.3400101124032515No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA91842.9766766494237227No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT90402.9300040190320615No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG78442.542361894390209No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC70282.2778836555041293No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA65422.120363527932273No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT61451.9916896788663738No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG39651.2851179132148367No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT39151.2689121387732876No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC38751.2559475192200484No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG38121.2355282434236967No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC36551.184642111677233No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT32691.0595335329884745No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG30941.0028133224430529No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA29070.9422037260316596No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT27340.8861317464638999No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG26680.8647401242010553No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG26010.8430243864493796No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG25200.8167710318540702No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC24560.7960276405688875No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT22820.7396315455122969No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT22510.7295839653585365No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT21920.7104611515175087No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT21470.6958759545201145No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT18560.6015583472702993No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG17820.5775738010968068No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAATCCTGTGTTCATGGCTTCTATG17400.5639609505659057No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT14800.47969092346985076No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGGGCTGGTGTTTTCCTTGATC14730.47742211504803395No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT14220.46089222511765393No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG12950.41972955803611944No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGGGTTGAGGGAGTCTTCTCTATG12460.40384789908340135No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGCCTGGCCAACTGT12410.40222732163924646No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGTAAAGGCTGGGGTCT12090.3918556259966551No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT11680.37856689095458496No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGTCATTGTGGGTTTTAACT11180.36236111651303593No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTATGTGCTCGTATCTTG11170.36203700102420494No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTCAGACCCAGGCTACACATCTAT11110.36009230809121906No Hit
CATAGAACACGAAGATTTCAGATTAGCCTTCCTTTCAATAGCCTTTTAGG11010.3568511532029093No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCATTAGGAAGTCTTCT10650.345182995604994No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTATGAGCATGCCTTTGA10610.34388653364967003No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT10260.33254249154058574No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT10230.33157014507409277No Hit
CATAGACCCTCTCTTACCCTTCCACCACACTGTCATTGTGGGTTTTAACT10220.33124602958526184No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG10180.3299495676299379No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGCATAAAAACTGTCGGAGGTC10120.32800487469695205No Hit
CATAGACCAGTTACCACAAGAAGCAATGTATGCTTTATTCTCACGTGGAT10110.32768075920812106No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGTATGCTTTATTCTCA9400.3046685595011214No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTGTTAATATAGAAGAGACACA8800.2852216301712626No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG8680.28133224430529086No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGCATAAAAACTGTCGGAGGTCTAT8360.27096054866269953No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT8130.26350589241958694No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT8090.26220943046426304No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAATGCCTGGCCAACTGTTTTTT7300.2366043068466156No Hit
CATAGAACACGAAGATTTCAGATTAGCCTACACTGTCATTGTGGGTTTTA7290.2362801913577846No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATCATGCCTGGCCAACTGTTTTT7170.23239080549181285No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGATGGGAGTGTCTG6800.22039853240506654No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT6720.21780560849441874No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG6510.21099918322896816No Hit
CATAGATGACATGGGAAATTATGCTGCTACCGTAGGGTCCTAAATGTCTT6340.2054892199188415No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGGTGCTGGAATAGTTGGACT6310.20451687345234854No Hit
CATAGAACATTGATTCCTGGCATGTCCACACTGTCAGACCCAGGCTACAC6120.19835867916455993No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGCCTCTCCAGTTTCTACGTGA5910.19155225389910932No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG5820.1886352144996305No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTACCCTGGGAGAAGAAA5730.18571817510015168No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG5650.18312525118950385No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC5380.17437413299106738No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTACACTGTCATTGTGGGTTTTAACT5320.1724294400580815No Hit
CATAGATGACATGGGAAATTATGCTGCTACCGTAGCCTCTCCAGTTTCTA5220.1691882851697717No Hit
CATAGATGGGACAGCGACAATGACAGGCCCTTCAGCATCATTTCTATGTG5120.16594713028146188No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA5030.16303009088198306No Hit
CATAGATGGCAAATGGTGGGATCTCTACACTGTCATTGTGGGTTTTAACT5030.16303009088198306No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACACAGTTGTGGAAAGTGCAATG4850.15719601208302542No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG4740.15363074170588464No Hit
CATAGATGACATGGGAAATTATGCTGCTACACTGTCATTGTGGGTTTTAA4560.147796662906927No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAACACTGACGAATGAGGAAAC4480.14520373899627917No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG4370.14163846861913837No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA4360.1413143531303074No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGACCATGGAGAGAATAATCC4230.13710085177550466No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT4140.13418381237602584No Hit
CATAGAACATTGATTCCTGGCATGTCCCATTGTAGATTTCTTTCACCTCC4120.13353558139836386No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGAGCATGCCTTTGA3670.11895038440096976No Hit
CATAGACCAGTTACCACAAGAAGCAATGTCGTCAGTGTGGGTCCTAAATG3450.11181984364668819No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCCAGGCCCTTCAGCATCA3310.10728222680305445No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA3270.10598576484773055No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGGTGGGTTGAGGGAGTC3220.10436518740357563No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGACAGTTGTGGAAAGTGCAATGA3130.10144814800409682No Hit
CATAGATGGCCCAGAATCCTTTGTAGATCCCATTGTAGATTTCTTTCACC3110.10079991702643484No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG3090.1001516860487729No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)