FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808497

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808497
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99287
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG95779.645774371267136No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG66276.674589825455497No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT57025.7429472136332045No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT49274.962381782106419No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC44134.444690644293814No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG39884.016638633456545No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT37673.794051587821165No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCCGGATTCAAGCAATTCTTCTAT29422.9631270961958767No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG24882.5058668305014757No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG24322.449464683191153No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA18391.8522062304229154No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG17341.7464522042160604No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT14151.4251614007876157No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA11941.2025743551522354No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGCAGAGACTTGGCCTCAG9870.9940878463444358No Hit
CATAGACCTGACCTCATGATCTGCCTTTTGCTCATCCATTGTTGATCTAT9430.9497718734577538No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC9030.9094846253789519No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT8570.8631542900883298No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT8490.8550968404725695No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA8460.8520752968666593No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC8260.8319316728272583No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA7480.7533715390735947No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA7270.7322207338322237No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG6970.7020052977731224No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA6830.6879047609455416No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGGCCTCAGTTTCCCCTCCTTCT6600.6647395933002307No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC6550.6597036872903804No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT6510.6556749624825002No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC5800.584165097142627No Hit
CATAGATGATGTGAAAAGGACCCATGGCTCTATGTGTAGAAAACCAGTGT5560.5599927482953457No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG5470.5509281174776154No Hit
CATAGACCTGACCTCATGATCTGCCTTTCTGGGTAGCTGCGACCTCTATG5420.5458922114677651No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA5380.5418634866598849No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTT4750.47841107093577206No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG4700.4733751649259218No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT4680.4713608025219817No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACCCAGGTGGGAGGA4430.4461812724727306No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA4350.4381238228569702No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG4120.41495865521165914No Hit
CATAGACACACCCAACTCTGCTCAGTGTACCTCCAAGCAGATCTGTGTTC4120.41495865521165914No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTTGAGGTAAAACT3710.3736642259308872No Hit
CATAGAGGCTGGGTGACTTGGTGAATGGGAGACACTGGGGGCACAAAGTT3690.3716498635269472No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGTAGCAGAGACTTGG3670.369635501123007No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTGGCCTCAGTTTCCCCTCCTTC3650.36762113871906693No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATAATTGAGACTCACCAGTG3130.3152477162166245No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG3120.3142405350146545No Hit
CATAGATTAGGGGTGACGGACTAGCCAGCAGAGACTTGGTCTCATAGAGG3060.3081974478028342No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG2750.27697483054176275No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG2660.26791019972403235No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA2300.23165167645311066No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA2160.21755113962553005No Hit
CATAGACCTGACCTCATGATCTGCCTGAGACTTGGTCTCATAGACCTGGC2080.20949369000976964No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGTCTCATAGAGGGGAGACACTG2050.20647214640385952No Hit
CATAGACCAGCTTTGCATGAGTGTGGACCAGCTTTGCATGAATGTTGGAG2040.20546496520188945No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA1940.19539315318218903No Hit
CATAGACCTGACCTCATGATCGGCCTGTGTTCTTTGCATGATCTATGTGT1920.1933787907782489No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG1880.18935006597036874No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1830.1843141599605185No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTATGCTGAAGTCCCATGAT1810.1822997975565784No Hit
CATAGATGATGTGAAAAGGACCCATGGGCGAAAGTGATCAGAAGCTCTAT1730.17424234794081803No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT1560.15712026750732724No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGAGCATCCCTCATTACTCT1530.1540987239014171No Hit
CATAGAGGCTGGGTGACTTGATGAATGTTGGAGAGGCACATCTATGTGTA1420.1430197306797466No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAGGATTGCTTGAGTCTATGTGTA1400.1410053682758065No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAAGCTGCTATGGGATCTT1360.13697664346792632No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC1350.13596946226595627No Hit
CATAGACCTGACCTCATGATCTGCCTCCAAGCAGATCTGTGTTCTATGTG1260.12690483144822584No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCTCCCTATGAGGTGGGAGGAT1190.11985456303443554No Hit
CATAGAGGCTGGGTGACTTGGTGAATAGAGGGGAGACACTGGGGGCACAA1180.11884738183246547No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAAGCTGCTATGGGATC1080.10877556981276502No Hit
CATAGACTGGCGGTGATTGCTTTCCTTACGGTAGCAAAGCTGCTATGGGA1080.10877556981276502No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCTCCTCTATAGGTGGGAGGAT1070.10776838861079496No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA1040.10474684500488482No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGACTTGGCCTCAGTTTCCCCTCCT1020.10273248260094472No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)