FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808498

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808498
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80373
Sequences flagged as poor quality0
Sequence length150
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG59397.389297400868451No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG42375.271670834733057No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA37774.69933933037214No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA35314.393266395431302No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA27493.4203028380177423No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT26693.3207669242158433No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG24503.048287360183146No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC23232.890274097022632No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC21922.727284038172023No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT18192.2631978400706703No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG15091.8774961740883132No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA14741.8339492117999825No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC8801.094895051820885No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGCATGTTGAGATGAATAATT6590.8199270899431401No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC6530.8124618964079977No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA5910.7353215632115263No Hit
CATAGACTCAAGCAATCCTCCCACCTACACTGACGACATGGTTCTACACA5670.7054607890709567No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGGAAAGCAATCACCGCCAGT5650.7029723912259092No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT5120.6370298483321514No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA5100.6345414504871039No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG4900.6096574720366292No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC4460.554912719445585No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAAAACCACTTGAACATTGCC4450.5536685205230613No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG4220.5250519453050153No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT4130.5138541550023018No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTGACGACATGGTTCTA4120.512609956079778No Hit
CATAGAAGATGGTCTGCTACACTGGTACGGGGGCAGATTAACAGGTCATC3900.4852375797842559No Hit
CATAGAGGTCGCAGCTACCCAGAAAGTGCAGCTATATTGGAGGAAAAGTC3830.47652818732658975No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA3730.46408619810135243No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC3710.4615978002563049No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGAGGGAAGGAAGGGCA3710.4615978002563049No Hit
CATAGACCCTTCTCCATGCCACATCATTTCCCCTCTCTCTGAATAACTCT3430.42676023042564043No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA3400.4230276336580693No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG3340.41556244012292687No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT2990.3720154778345962No Hit
CATAGACTCAAGCAATCCTCCCACCTACGGTGTCAGAGATAGCACAGTGG2950.36703868214450125No Hit
CNTAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG2920.36330608537693004No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAGCACTGTT2820.35086409615169273No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA2760.34339890261655037No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT2610.32473591877869434No Hit
CATAGATGTGCCTCTCCAACATTCATGCAAAGCTGGTCCACACTCATGCA2600.3234917198561706No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGGACATGGTTCCACACTCAT2470.30731713386336207No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAATCAATGC2460.30607293494083837No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT2450.3048287360183146No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCAGTGTCCATGGGTCCTTT2420.3010961392507434No Hit
CATAGATCACCTACACAGACAGCTTTCCGCACCTTTCAGCATCTCTTTGG2400.29860774140569596No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTATCTTAGGTAGAGG2380.2961193435606485No Hit
CATAGACTCAAGCAATCCTCCCACCTGCACCCTGAAGTTTGAGAGCAAGT2310.28740995110298234No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT2210.27496796187774497No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGGAGACAGCCGCTCACCTC2120.2637701715750314No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC2100.26128177372998396No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG2040.25381658019484155No Hit
CNTAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG2010.25008398342727034No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA2010.25008398342727034No Hit
CATAGATGTGCCTCTCCAACATTCATGAATCCGGGAGGGAAGGAAGGGCA2000.24883978450474664No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC2000.24883978450474664No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGTCTATGAGACCAAAGGCAGATC1990.2475955855822229No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAAGGGATTA1840.2289326017443669No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC1770.22022320928670075No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGTCTCGCTAATAGTTTTTCCAAAT1760.21897901036417702No Hit
CNTAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA1670.20778122006146343No Hit
CATAGATCAACAATGGATGAGCAAAAGGCAGATCATGAGGTCAGGTCTAT1600.19907182760379732No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGTCTTCTGTGTTTGGTCTATGAG1590.19782762868127357No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGCAGATCATGAGGTCAGGTCTA1560.19409503191370236No Hit
CATAGATCACCCAGGTAATCACTAGGTGAGGAGCACCCTGAAGTTTGAGA1550.19285083299117864No Hit
CNTAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC1530.19036243514613116No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA1510.18787403730108368No Hit
CNTAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA1420.1766762469983701No Hit
CATAGATGTGCCTCTCCAACATTCATACATAGATGTGCCTCTCCACACTC1420.1766762469983701No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG1400.17418784915332264No Hit
CATAGACTCAAGCAATCCTCCCACCTGACTCAATCAATGCTAGTCCCCCA1370.17045525238575143No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGTGCAGCT1330.1654784566956565No Hit
CATAGAGGGGCATGCTGGATAAATCTATGAGACCAAGAGTTTTTCCAAAT1250.15552486531546664No Hit
CATAGATGTGCCTCTCCAACATTCATGCAAAGCTGGCCACACTCATGCAA1230.15303646747041919No Hit
CNTAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT1190.14805967178032425No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG1170.14557127393527677No Hit
CNTAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC1130.14059447824518184No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCCACCCTTATGATCGTATCTA1110.13810608040013436No Hit
CATAGACCATTTGCCGCGTTCTGAAGGGTCTCATAGAGGAGCACCCTGAA1100.13686188147761064No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA1080.13437348363256316No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCCTGTAGCTGAGACTA1070.13312928471003943No Hit
CATAGAACACAGATCTGCTTGGAGGTGATCATGGGACTTCAGCATGTTGA1050.13064088686499198No Hit
CATAGAGCTTCTGATCACTTTCGCCCATGGGTCCTTTTCACATCATCTAT1010.12566409117489705No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA1000.12441989225237332No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA980.12193149440732584No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCAGCTATATTGGAGGAAAAGT980.12193149440732584No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACAGGCAGATCATG980.12193149440732584No Hit
CATAGAACTTTGTGCCCCCAGTGTCTGCTACCGTAGGCTAGTCCGTCACC900.11197790302713599No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC890.11073370410461224No Hit
CNTAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT880.10948950518208851No Hit
CATAGAAGGAGGGGAAACTGAGGCCATAGAAGGAGGGAAGGAAGGGCAAA860.10700110733704105No Hit
CATAGAGCTTCTGATCACTTTCGCCCCATGGGTCCTTTTCACATCATCTA830.10326851056946984No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)