FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005808502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005808502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155127
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4457228.732586848195353No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG90635.842309849349243No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG61623.972229205747549No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA56223.6241273279313075No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC55443.5738459455800733No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA44062.840253469737699No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC37062.3890102947907197No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT33382.151785311390022No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG30971.9964287325868482No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT27591.7785427423981641No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG23231.4974827077169028No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC19521.2583238249950042No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA18011.1609842258278702No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA17651.1377774339734539No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG16821.0842728860868835No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC15300.9862886538126826No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA14600.9411643363179847No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA13520.8715439607547365No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC12110.7806506926582736No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT9900.6381867759964416No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA8930.5756573646109318No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGTGCAGCTATATTGGAGGAA8520.5492274072211801No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA8280.5337562126515694No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAATGGCATTAAATGACTTGCCCAA8280.5337562126515694No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC8060.5195742842960929No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCATTTCCCCTCTCTCTGAATAACT7980.514417219439556No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG7830.5047477228335493No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAAGAATGAGGAGAGTACTA7380.47573923301552923No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT6810.43899514591270383No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA6810.43899514591270383No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT6430.4144990878441535No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG5590.36034990685051604No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAGTTTTTCCAAATATAAGAT5180.3339199494607644No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGCCATGGGTCCTTTTC4990.32167192042648923No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA4610.29717586235793897No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC4380.2823493008953954No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC4190.2701012718611202No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTGGGGGCAGATTAACAGGTC4120.26558884011165046No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGAGGGAAGGAAGGGCA4020.25914250904097935No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT3920.2526961779703082No Hit
CATAGAGAGGTCGCCCAGGTATTTCTGTTCTACACATAGAAGGAGGGAAG3820.24624984689963708No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT3630.23400181786536195No Hit
CATAGAGCTTCGGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG3030.19532383144133517No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACAGCCCATGGGTCCTTTT2970.1914560327989325No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC2830.1824311692999929No Hit
CATAGAGCTTCTGATCACTTTCGCCCCATGGGTCCTTTTCACATCATCTA2820.18178653619292579No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGACAGCCGCTCACCTCTA2690.17340630580105335No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA2680.17276167269398623No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2670.17211703958691912No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA2610.16824924094451643No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG2500.16115827676677819No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA2400.15471194569610705No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA2370.15277804637490572No Hit
CATAGAGCTTCCGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG2360.1521334132678386No Hit
CATAGACCCTTCTCCATGCCACATCATCCATGGGTCCTTTTCACATCATC2180.1405300173406306No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCCTCTCTCCAGAACCCACCAT2150.13859611801942925No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCTAAGCATGTTG2130.13730685180529503No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAATAGAGTCTCGCTAATAGTT2110.1360175855911608No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2090.13472831937702656No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA2080.13408368626995945No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT1970.1269927220922212No Hit
CATAGAGGGGCATGCTGGATAAATCTTAACTTCAGGGTGCTCCTCTATGA1940.12505882277101987No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGCCCCACCCTTATGATCGTATC1790.1153893261650132No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT1770.11410005995087895No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA1750.11281079373674473No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1750.11281079373674473No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1700.10958762820140917No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1680.10829836198727495No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT1660.1070090957731407No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATAA1640.10571982955900648No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC1580.10185203091660382No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)