FastQCFastQC Report
Sat 18 Jun 2022
EGAF00006011715

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006011715
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33386866
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAACCCTCTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCC395970.11860052992095754No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT339810.10177954408778589No Hit
CTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAG334560.10020706945060372No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)