FastQCFastQC Report
Wed 20 Apr 2022
EGAF00006040588

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006040588
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74621878
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG179950.027.08474594
TAAGTCG79950.022.3389694
CAAGTCG135800.010.76362294
AAAGTCG127000.08.65984294
GAAGTCG196550.07.31722194
Produced by FastQC (version 0.11.5)