FastQCFastQC Report
Wed 20 Apr 2022
EGAF00006040646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006040646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77399680
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG174800.016.34782894
TAAGTCG69550.014.79942594
CAAGTCG139850.06.58705894
AAAGTCG144150.05.15157894
Produced by FastQC (version 0.11.5)