FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006040677

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006040677
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13131288
Sequences flagged as poor quality0
Sequence length126
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTGA144300.010.394879120
ACGTCTG168700.09.247068120
ACACGTC187050.09.141826120
CACACGT218300.09.097458120
ATCGGAA448150.09.0504265120
GCACACG247000.08.939159120
GATCGGA477050.08.879461120
TCGGAAG440800.08.792993120
CACGTCT190150.08.771912120
AGATCGG517500.08.54482120
CGGAAGA423400.08.502492120
AAGATCG146850.07.8854985120
AGCACAC324150.07.681532120
AGAGCAC372550.07.5049386120
TAGATCG66100.07.443174120
CAGATCG211600.07.343953120
GAAGAGC479350.07.071988120
GAGATCG232900.06.9556875120
AAGAGCA447950.06.697092120
GAGCACA365050.06.664757118-119
Produced by FastQC (version 0.11.5)