FastQCFastQC Report
Wed 20 Apr 2022
EGAF00006040687

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006040687
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67717079
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG223700.054.96290294
TAAGTCG140800.032.41264394
GAAGTCG237550.017.52978594
CAAGTCG140100.016.94147194
AAAGTCG138550.012.51750394
CTAAGTC245000.07.347347394
ATAAGTC218650.06.620626494
Produced by FastQC (version 0.11.5)