FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006040692

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006040692
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37349058
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG117950.036.85883794
TAAGTCG51250.029.89658794
GAAGTCG128450.011.92837794
CAAGTCG78450.011.56277894
AAAGTCG80350.09.00808994
ATAAGTC88250.05.405665492-93
CTAAGTC113450.05.323490692-93
Produced by FastQC (version 0.11.5)