FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006040709

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006040709
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51945077
Sequences flagged as poor quality0
Sequence length100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG153950.054.95290894
TAAGTCG103700.033.7656794
GAAGTCG165800.017.46200294
CAAGTCG99700.016.97091394
AAAGTCG100500.012.580194
CTAAGTC194450.06.62278294
ATAAGTC185850.06.297013894
Produced by FastQC (version 0.11.5)