FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006040714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006040714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36334082
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGTCGG110700.030.8238594
TAAGTCG48350.025.17683894
GAAGTCG117700.09.74341694
CAAGTCG72850.09.41935594
AAAGTCG80150.07.095445694
Produced by FastQC (version 0.11.5)