FastQCFastQC Report
Sat 23 Apr 2022
EGAF00006040717

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006040717
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21733237
Sequences flagged as poor quality0
Sequence length126
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT280850.09.868444120
CGTCTGA214900.09.602917120
CACACGT331600.09.58832120
ACACGTC278800.09.532177120
ACGTCTG247450.09.1882515120
GCACACG369300.09.096826120
AGATCGG778850.09.065751120
GATCGGA712850.08.88683120
TCGGAAG658550.08.808843120
ATCGGAA671700.08.4667120
CGGAAGA640750.08.435626120
CGTTTCG35600.08.425606120
TAGATCG117750.07.79492120
AAGATCG249700.07.615911120
AGCACAC508800.07.3808837120
AGAGCAC577700.07.372879120
CAGATCG294700.07.3690176120
GAGCACA569350.07.175446120
GAGATCG350300.06.9015408120
GTCTGAA341900.06.3517094120
Produced by FastQC (version 0.11.5)