FastQCFastQC Report
Wed 20 Apr 2022
EGAF00006040732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006040732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73242453
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAAAAT836150.06.80141161
CTGAAAT748050.06.55945441
CGCGAAT21404.3655746E-116.36915871
CTGAAAC602450.06.33481
CTAAAAT513350.06.29901651
CTAAAAC343200.06.25844961
CAAAAAC649200.06.2406041
AAAAATC747250.06.1513552
AAATCCA682550.06.14226064
CGAAAAT91600.06.10589551
AAAATCC544450.06.00826553
CTTAAAT392100.05.92144871
GGAAAAT770600.05.9161691
AAATCTA394500.05.82585574
AATCCGC78800.05.78553345
CTGAGAT706350.05.75564531
TGAAATC541150.05.72355182
CTCAAAT458650.05.6361061
GAAAATC541550.05.5631062
AAAAATT1230500.05.5498582
Produced by FastQC (version 0.11.5)