FastQCFastQC Report
Wed 13 Jul 2022
EGAF00006067923

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006067923
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences397844482
Sequences flagged as poor quality0
Sequence length151
%GC40

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGAGAGATCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT19403000.48770313220028527No Hit
CCCGAGAGATCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA17448390.4385731306938172No Hit
CCCGAGAGATCGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC4614710.11599281148255312No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)