FastQCFastQC Report
Wed 13 Jul 2022
EGAF00006067936

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006067936
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440614416
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCATATGAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT25325860.57478509736277No Hit
AGCCATATGAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA18355280.41658373701508666No Hit
AGCCATATGAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC7235940.16422385962060762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)