FastQCFastQC Report
Wed 13 Jul 2022
EGAF00006067956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006067956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences310393529
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGACGAATAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT18251520.5880122584643187No Hit
GTTGACGAATATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA12056330.388420790821319No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGCC9761670.31449334757233294TruSeq Adapter, Index 6 (100% over 50bp)
GTTGACGAATAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC4375280.140959124183288No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)