FastQCFastQC Report
Fri 22 Jul 2022
EGAF00006067957

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006067957
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences310393529
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGACGAATAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT15219830.490339797000085No Hit
GTTGACGAATATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA12816260.4129035821490983No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT10380770.3344389953438752Illumina Single End PCR Primer 1 (100% over 50bp)
GTTGACGAATAGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC4066040.13099628761912752No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)