FastQCFastQC Report
Wed 13 Jul 2022
EGAF00006067968

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006067968
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences501968057
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCACGCAAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT38158040.7601686893793722No Hit
CTCCACGCAAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA28062440.5590483220728127No Hit
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGATCATCTCGTATGCC7901290.15740623112996213TruSeq Adapter, Index 7 (100% over 50bp)
CTCCACGCAAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC6583440.13115256853883833No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)