FastQCFastQC Report
Fri 29 Jul 2022
EGAF00006067974

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006067974
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences272316436
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTGATTAGCAGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT8604400.31597064526799257No Hit
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC7470410.2743282818228423No Hit
AGTGATTAGCATGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA6697030.2459282332851918No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)