FastQCFastQC Report
Fri 22 Jul 2022
EGAF00006067977

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006067977
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences314076099
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTAATTGAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT17998510.5730620718133665No Hit
TCTTAATTGAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA15265600.48604780970614386No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT5849100.18623193610157518Illumina Single End PCR Primer 1 (100% over 50bp)
TCTTAATTGAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC3806420.12119419504124698No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)