FastQCFastQC Report
Sun 17 Jul 2022
EGAF00006067988

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006067988
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences505763442
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGAGAGATCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT28679720.5670579883470502No Hit
CCCGAGAGATCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA21003590.41528485959647515No Hit
CCCGAGAGATCGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC6894890.1363263816130071No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)