FastQCFastQC Report
Wed 13 Jul 2022
EGAF00006068021

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006068021
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences509575586
Sequences flagged as poor quality0
Sequence length151
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACCTGTCGGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT27027700.5303962894329086No Hit
TCACCTGTCGGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA23873500.4684977195905143No Hit
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT7154890.14040880679083398Illumina Single End PCR Primer 1 (100% over 50bp)
TCACCTGTCGGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC5102490.10013215193555211No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)