FastQCFastQC Report
Wed 13 Jul 2022
EGAF00006068028

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00006068028
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences441001497
Sequences flagged as poor quality0
Sequence length151
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGAGCCCGCCGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT9283250.21050382058000133No Hit
TAGAGCCCGCCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA6049060.1371664278046657No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)